Thuy Doan, MD, PhD
Associate Professor
Proctor Foundation
Chancellor/EVC/FAS

Education & Training

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• M.D. Stanford University
• Ph.D. University of Washington

Websites

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• Doan Lab (doanlab.ucsf.edu)

Grants and Projects

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• Improving Corneal Ulcer Outcomes with Unbiased Pathogen and Antimicrobial Resistance Detection, NIH, 2022-2026
• Seasonal Conjunctivitis Outbreak Reporting for Prevention and Improved Outcomes (SCORPIO), NIH, 2021-2026
• Ocular Surface Microbiome, Virome, and Pathogens in Ophthalmic Disease and Health, NIH, 2016-2021

Publications (111)

Top publication keywords:
Eye Infections, BacterialDrug Resistance, BacterialEye InfectionsHigh-Throughput Nucleotide SequencingAnti-Bacterial AgentsMacrolidesConjunctivitisGastrointestinal MicrobiomeEye Infections, ParasiticSevere Acute MalnutritionEye Infections, ViralUveitisMetagenomicsAzithromycinMass Drug Administration

• Immunization-induced antigen archiving enhances local memory CD8+ T cell responses following an unrelated viral infection.
  NPJ vaccines 2024 Doan TA, Forward TS, Schafer JB, Lucas ED, Fleming I, Uecker-Martin A, Ayala E, Guthmiller JJ, Hesselberth JR, Morrison TE, Tamburini BAJ
• Use of Large Language Models to Assess the Likelihood of Epidemics From the Content of Tweets: Infodemiology Study.
  Journal of medical Internet research 2024 Deiner MS, Deiner NA, Hristidis V, McLeod SD, Doan T, Lietman TM, Porco TC
• Mass Azithromycin Distribution to Prevent Child Mortality in Burkina Faso: The CHAT Randomized Clinical Trial.
  JAMA 2024 Oldenburg CE, Ouattara M, Bountogo M, Boudo V, Ouedraogo T, Compaoré G, Dah C, Zakane A, Coulibaly B, Bagagnan C, Hu H, O'Brien KS, Nyatigo F, Keenan JD, Doan T, Porco TC, Arnold BF, Lebas E, Sié A, …
• Gut Microbiome Diversity and Antimicrobial Resistance After a Single Dose of Oral Azithromycin in Children: A Randomized Placebo-Controlled Trial.
  The American journal of tropical medicine and hygiene 2024 Doan T, Liu Z, Sié A, Dah C, Bountogo M, Ouattara M, Coulibaly B, Kiemde D, Zonou G, Nebie E, Brogdon J, Lebas E, Hinterwirth A, Zhong L, Chen C, Zhou Z, Porco T, Arnold BF, Oldenburg CE, Lietman TM
• Temporal Trends in Phenotypic Macrolide and Nonmacrolide Resistance for Streptococcus pneumoniae Nasopharyngeal Samples Up to 36 Months after Mass Azithromycin Administration in a Cluster-Randomized Trial in Niger.
  The American journal of tropical medicine and hygiene 2023 Hazel A, Arzika AM, Abdou A, Lebas E, Porco TC, Maliki R, Doan T, Lietman TM, Keenan JD, Blumberg S

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• Heterogenous pathogen profile associated with acute conjunctivitis in Nepal.
  International health 2023 Chaudhary M, Sitaula S, Ruder K, Chen C, Zhong L, Heng Lu Y, Abraham T, Yu D, Hinterwirth A, Lietman TM, Doan T, Seitzman GD, SCORPIO Study Group
• Wastewater-Based Surveillance of Antimicrobial Resistance in Niger: An Exploratory Study.
  The American journal of tropical medicine and hygiene 2023 Ousmane S, Kollo IA, Jambou R, Boubacar R, Arzika AM, Maliki R, Amza A, Liu Z, Lebas E, Colby E, Zhong L, Chen C, Hinterwirth A, Doan T, Lietman TM, O'Brien KS
• Aqueous Fluid Transcriptome Profiling Differentiates Between Non-Neovascular and Neovascular AMD.
  Investigative ophthalmology & visual science 2023 Kaidonis G, Lamy R, Wu J, Yang D, Psaras C, Doan T, Stewart JM
• Risk of failing both methotrexate and mycophenolate mofetil from the First-line Antimetabolites as Steroid-sparing Treatment (FAST) uveitis trial.
  Journal of ophthalmic inflammation and infection 2023 Reddy AK, Miller DC, Sura AA, Rathinam SR, Gonzales JA, Thundikandy R, Kanakath A, Murugan B, Vedhanayaki R, Lim LL, Suhler EB, Doan T, Al-Dhibi HA, Goldstein DA, Arellanes-Garcia L, Acharya NR
• Isolated Ocular Mpox without Skin Lesions, United States.
  Emerging infectious diseases 2023 Nguyen MT, Mentreddy A, Schallhorn J, Chan M, Aung S, Doernberg SB, Babik J, Miles K, Yang K, Lydon E, Minter DJ, Gonzales J, Shantha J, Doan T, Seitzman GD
• Metagenomic Deep Sequencing for Orbital Inflammatory Disease.
  Ocular immunology and inflammation 2023 Vagefi MR, Idowu OO, Miller A, Doan T, Chen C, Hinterwirth A, Zhong L, Ahmad M, Ashraf DC, Grob SR, Kersten RC, Winn BJ
• Case Series: Unbiased Deep Sequencing Analysis of Acute Infectious Conjunctivitis in an Ambulatory Eye Center in Berkeley, California.
  Optometry and vision science : official publication of the American Academy of Optometry 2023 Kanai K, Whiteside M, Wong M, La T, Nassiri M, Lee S, Yeung SK, Coulter A, Roufail M, Ruder K, Chen C, Liu D, Abraham T, Hinterwirth A, Lietman TM, Doan T, Seitzman GD, Seasonal Conjunctivitis …
• Association between Quality of Life and Visual Acuity in a Randomized Clinical Trial of Patients with Uveitis Taking Antimetabolites.
  Ocular immunology and inflammation 2023 Chattopadhyay A, Rathinam SR, Gonzales JA, Kelly NK, Thundikandy R, Kanakath A, Murugan SB, Vedhanayaki R, Lim LL, Suhler EB, Al-Dhibi HA, Doan T, Ebert CD, Porco TC, Acharya NR, FAST Research Group
• Reduced Dose Methotrexate and Mycophenolate Mofetil in Noninfectious Uveitis: A Sub-Analysis from the First-Line Antimetabolites as Steroid Sparing Therapy (FAST) Trial.
  Ocular immunology and inflammation 2023 Sura AA, Sun Y, Reddy AK, Rathinam SR, Gonzales JA, Thundikandy R, Vedhanayaki R, Kanakath A, Murugan B, Doan TA, Lim LL, Suhler EB, Al-Dhibi HA, Acharya NR, FAST Research Group
• Viruses Associated with Acute Conjunctivitis in Vanuatu.
  The American journal of tropical medicine and hygiene 2023 Johnson K, Taleo F, Willie K, Amel E, Nanu M, Alguet M, Wass J, Rymill P, Solomon A, Ruder K, Chen C, Zhong L, Hinterwirth A, Liu D, Abraham T, Seitzman G, Lietman T, Doan T, SCORPIO Study Group
• Deep sequencing analysis of acute conjunctivitis in Burkina Faso, Africa.
  International health 2023 Bountogo M, Sié A, Coulibaly B, Ruder K, Chen C, Zhong L, Colby E, Lebas E, Deiner M, Hinterwirth A, Lietman TM, Seitzman GD, Doan T
• Ocular Rosacea microBiome Study (ORBS)-sub-microbial versus antibiotic dosing of doxycycline versus placebo in treatment of symptomatic ocular rosacea: study protocol for a parallel-arm randomized clinical trial.
  Trials 2022 Mahmud H, Keenan JD, Gonzales J, Schallhorn J, Chan M, Arnold B, Cavallino V, Lietman TM, Doan T, Seitzman GD
• Gut Microbiome among Children with Uncomplicated Severe Acute Malnutrition in a Randomized Controlled Trial of Azithromycin versus Amoxicillin.
  The American journal of tropical medicine and hygiene 2022 Oldenburg CE, Hinterwirth A, Dah C, Millogo O, Coulibaly B, Ouedraogo M, Sié A, Chen C, Zhong L, Ruder K, Lebas E, Nyatigo F, Arnold BF, O'Brien KS, Doan T
• Case-Control Study Examining the Composition of the Gut Microbiome in Individuals With and Without Immune-Mediated Dry Eye.
  Cornea 2022 Goodman CF, Doan T, Mehra D, Betz J, Locatelli E, Mangwani-Mordani S, Kalahasty K, Hernandez M, Hwang J, Galor A
• Deep sequencing analysis of clinical samples from patients with acute infectious conjunctivitis during the COVID-19 delta surge in Madurai, India.
  Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology 2022 Lalitha P, Prajna NV, Gunasekaran R, Teja GV, Sharma SS, Hinterwirth A, Ruder K, Zhong L, Chen C, Deiner M, Huang C, Pinsky BA, Lietman TM, Doan T, Seitzman GD, SCORPIO (Seasonal Conjunctivitis …
• Role of Ophthalmology in Emerging Infectious Diseases.
  JAMA ophthalmology 2022 Rose-Nussbaumer J, Doan T
• Outpatient human coronavirus associated conjunctivitis in India.
  Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology 2022 Prajna NV, Lalitha P, Teja GV, Gunasekaran R, Sharma SS, Hinterwirth A, Ruder K, Zhong L, Chen C, Deiner M, Huang C, Pinsky BA, Lietman TM, Seitzman GD, Doan T, SCORPIO (Seasonal Conjunctivitis …
• Keeping an eye on pink eye: a global conjunctivitis outbreak expert survey.
  International health 2022 Kaur G, Seitzman GD, Lietman TM, McLeod SD, Porco TC, Doan T, Deiner MS
• COVID-19 Related Shifts in Social Interaction, Connection, and Cohesion Impact Psychosocial Health: Longitudinal Qualitative Findings from COVID-19 Treatment Trial Engaged Participants.
  International journal of environmental research and public health 2022 Perez-Brumer A, Balasa R, Doshi A, Brogdon J, Doan T, Oldenburg CE
• Bilateral anterior and intermediate uveitis in SARS-CoV-2 associated multisystem inflammatory syndrome in a pediatric patient.
  Pediatric rheumatology online journal 2022 Shantha J, Reddy AK, Sura A, Tsang A, Moussa K, Acharya N, Gonzales J, Doan T
• Prevalence of Epstein-Barr Virus in Patients with Intraocular Inflammation.
  Ocular immunology and inflammation 2022 Moussa K, Gonzales JA, Shantha J, Acharya NR, Doan T
• Gut Resistome after Antibiotics among Children with Uncomplicated Severe Acute Malnutrition: A Randomized Controlled Trial.
  The American journal of tropical medicine and hygiene 2022 Oldenburg CE, Hinterwirth A, Ourohiré M, Dah C, Ouédraogo M, Sié A, Boudo V, Chen C, Ruder K, Zhong L, Lebas E, Nyatigo F, Arnold BF, O'Brien KS, Doan T
• Effect of Single-dose Azithromycin on Pneumococcal Carriage and Resistance: A Randomized Controlled Trial.
  The Pediatric infectious disease journal 2022 Coulibaly B, Kiemde D, Zonou G, Sié A, Dah C, Bountogo M, Brogdon J, Hu H, Lebas E, Porco TC, Doan T, Lietman TM, Oldenburg CE
• Acute Keratoconjunctivitis Resulting From Coinfection With Avian Newcastle Virus and Human Adenovirus.
  Cornea 2022 Prajna NV, Lalitha P, Chen C, Zhong L, Lietman TM, Doan T, Seitzman GD
• Detection of Leptospirosis Genome from the Aqueous Humor of a Patient with Bilateral Uveitis.
  Ocular immunology and inflammation 2022 Gonzales JA, Sundararajan M, Qian Y, Hwang T, Doan T
• Interepidemic Respiratory Syncytial Virus during the COVID-19 Pandemic.
  Microbiology spectrum 2022 Huang C, Sahoo MK, Verghese M, Sibai M, Solis D, Mfuh KO, Kurzer J, Hogan CA, Doan TA, Pinsky BA
• Intraocular Inflammation Associated with IRAK4 Deficiency.
  Ocular immunology and inflammation 2022 Gonzales JA, Nortey J, Reddy A, Doan T, Acharya NR
• Occult cause of uveitis-glaucoma-hyphema syndrome diagnosed during treatment with endocyclophotocoagulation (ECP).
  American journal of ophthalmology case reports 2022 Sura AA, Reddy AK, Babic K, Saifee M, Acharya NR, Gonzales JA, Han Y, Doan TA
• Vaccine-Associated Measles Encephalitis in Immunocompromised Child, California, USA.
  Emerging infectious diseases 2022 Costales C, Sahoo MK, Huang C, Guimaraes CV, Born D, Kushner L, Gans HA, Doan TA, Pinsky BA
• Concordance of ompA types in children re-infected with ocular Chlamydia trachomatis following mass azithromycin treatment for trachoma.
  PLoS neglected tropical diseases 2022 Mosenia A, Chin SA, Alemayehu W, Melese M, Lakew T, Zhou Z, Doan T, Cevallos V, Lietman TM, Keenan JD
• Neonatal azithromycin administration for prevention of infant mortality.
  NEJM evidence 2022 Oldenburg CE, Sié A, Bountogo M, Zakane A, Compaoré G, Ouedraogo T, Koueta F, Lebas E, Brogdon J, Nyatigo F, Doan T, Porco TC, Arnold BF, Lietman TM, NAITRE Study Team
• Biomarkers for primary open-angle glaucoma progression.
  Experimental eye research 2022 Zhao M, Ma P, Xie Q, Bui AD, Yonamine S, Hinterwirth A, Zhong L, Chen C, Doan T, Han Y
• Effect of biannual azithromycin distribution on antibody responses to malaria, bacterial, and protozoan pathogens in Niger.
  Nature communications 2022 Arzika AM, Maliki R, Goodhew EB, Rogier E, Priest JW, Lebas E, O'Brien KS, Le V, Oldenburg CE, Doan T, Porco TC, Keenan JD, Lietman TM, Martin DL, Arnold BF, MORDOR-Niger Study Group
• Outcomes of Uveitic Macular Edema in the First-line Antimetabolites as Steroid-Sparing Treatment Uveitis Trial.
  Ophthalmology 2022 Tsui E, Rathinam SR, Gonzales JA, Thundikandy R, Kanakath A, Balamurugan S, Vedhanayaki R, Lim LL, Suhler EB, Al-Dhibi HA, Doan T, Keenan J, Ebert CD, Kim E, Madow B, Porco TC, Acharya NR, FAST …
• Time to Uveitis Control with Methotrexate and Mycophenolate Mofetil.
  Ophthalmology 2022 Bui AD, Kong CL, Kelly NK, Rathinam SR, Gonzales JA, Thundikandy R, Kanakath A, Murugan B, Vedhanayaki R, Lim LL, Suhler EB, Al-Dhibi HA, Doan T, Acharya NR, First-Line Antimetabolites as Steroid-…
• Very late onset LASIK flap Acremonium fungal keratitis confirmed by metagenomic deep sequencing.
  American journal of ophthalmology case reports 2022 Greenwald MF, Redd TK, Doan T, McLeod SD, Seitzman GD
• Impact of Sample Collection Order on the Diagnostic Performance of Metagenomic Deep Sequencing for Infectious Keratitis.
  Cornea 2022 Redd TK, Lalitha P, Prajna NV, Sikha M, Gunasekaran R, Hinterwirth A, Chen C, Zhong L, Liu Z, Lietman TM, Keenan JD, Doan T, Seitzman GD
• Gut Resistome of Preschool Children After Prolonged Mass Azithromycin Distribution: A Cluster-randomized Trial.
  Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2021 Arzika AM, Maliki R, Abdou A, Mankara AK, Harouna AN, Cook C, Hinterwirth A, Worden L, Zhong L, Chen C, Ruder K, Zhou Z, Lebas E, O'Brien KS, Oldenburg CE, Le V, Arnold BF, Porco TC, Keenan JD, …
• Effect of Azithromycin on the Ocular Surface Microbiome of Children in a High Prevalence Trachoma Area.
  Cornea 2021 Doan T, Gebre T, Ayele B, Zerihun M, Hinterwirth A, Zhong L, Chen C, Ruder K, Zhou Z, Emerson PM, Porco TC, Keenan JD, Lietman TM
• Effect of Oral Azithromycin vs Placebo on COVID-19 Symptoms in Outpatients With SARS-CoV-2 Infection: A Randomized Clinical Trial.
  JAMA 2021 Oldenburg CE, Pinsky BA, Brogdon J, Chen C, Ruder K, Zhong L, Nyatigo F, Cook CA, Hinterwirth A, Lebas E, Redd T, Porco TC, Lietman TM, Arnold BF, Doan T
• Detection of Tropheryma whipplei Genome From the Aqueous Humor by Metagenomic Sequencing.
  Annals of internal medicine 2021 Gonzales JA, Doan T, VanZante A, Stewart JM, Sura A, Reddy A, Rasool N
• Age-based targeting of biannual azithromycin distribution for child survival in Niger: an adaptive cluster-randomized trial protocol (AVENIR).
  BMC public health 2021 O'Brien KS, Arzika AM, Amza A, Maliki R, Ousmane S, Kadri B, Nassirou B, Mankara AK, Harouna AN, Colby E, Lebas E, Liu Z, Le V, Nguyen W, Keenan JD, Oldenburg CE, Porco TC, Doan T, Arnold BF, Lietman …
• Poultry Ownership and Genetic Antibiotic Resistance Determinants in the Gut of Preschool Children.
  The American journal of tropical medicine and hygiene 2021 Brogdon JM, Sié A, Dah C, Ouermi L, Coulibaly B, Lebas E, Zhong L, Chen C, Lietman TM, Keenan JD, Doan T, Oldenburg CE
• Single-dose azithromycin for child growth in Burkina Faso: a randomized controlled trial.
  BMC pediatrics 2021 Sié A, Coulibaly B, Dah C, Bountogo M, Ouattara M, Compaoré G, Brogdon JM, Godwin WW, Lebas E, Doan T, Arnold BF, Porco TC, Lietman TM, Oldenburg CE
• Peripheral Blood Transcriptome in Patients with Sarcoidosis-Associated Uveitis.
  Ocular immunology and inflammation 2021 Gonzales JA, Takhar JS, Joye A, Acharya NR, Chen C, Hinterwirth A, Doan T
• Indirect effect of oral azithromycin on the gut resistome of untreated children: a randomized controlled trial.
  International health 2021 Oldenburg CE, Hinterwirth A, Worden L, Sié A, Dah C, Ouermi L, Coulibaly B, Zhong L, Chen C, Ruder K, Lietman TM, Keenan JD, Doan T
• Comprehensive pathogen detection for ocular infections.
  Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology 2021 Doan T, Sahoo MK, Ruder K, Huang C, Zhong L, Chen C, Hinterwirth A, Lin C, Gonzales JA, Pinsky BA, Acharya NR
• Dual Molecular Diagnosis of Microsporidia (Encephalitozoon hellem) Keratoconjunctivitis in an Immunocompetent Adult.
  Cornea 2021 Ma KK, Kinde B, Doan T, Jacobs DS, Ong Tone S
• Vitreoretinal Lymphoma: A Literature Review and Introduction of a New Diagnostic Method.
  Asia-Pacific journal of ophthalmology (Philadelphia, Pa.) 2021 Takhar J, Doan T, Gonzales JA
• Reduction of Coronavirus Burden With Mass Azithromycin Distribution.
  Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2020 Doan T, Hinterwirth A, Arzika AM, Worden L, Chen C, Zhong L, Oldenburg CE, Keenan JD, Lietman TM
• Macrolide and Nonmacrolide Resistance with Mass Azithromycin Distribution.
  The New England journal of medicine 2020 Doan T, Worden L, Hinterwirth A, Arzika AM, Maliki R, Abdou A, Zhong L, Chen C, Cook C, Lebas E, O'Brien KS, Oldenburg CE, Chow ED, Porco TC, Lipsitch M, Keenan JD, Lietman TM
• Metagenomic Deep Sequencing to Investigate for an Infectious Etiology of Iridocorneal Endothelial Syndrome.
  Cornea 2020 Sutra P, Rose-Nussbaumer J, Gonzales JA, Wang K, Hinterwirth A, Seitzman G, Bloomer M, Acharya N, Doan T
• Gut Bacterial Diversity and Growth among Preschool Children in Burkina Faso.
  The American journal of tropical medicine and hygiene 2020 Digitale J, Sié A, Coulibaly B, Ouermi L, Dah C, Tapsoba C, Bärnighausen T, Lebas E, Arzika AM, Glymour MM, Keenan JD, Doan T, Oldenburg CE
• Rapid Reduction of Campylobacter Species in the Gut Microbiome of Preschool Children after Oral Azithromycin: A Randomized Controlled Trial.
  The American journal of tropical medicine and hygiene 2020 Hinterwirth A, Sié A, Coulibaly B, Ouermi L, Dah C, Tapsoba C, Zhong L, Chen C, Lietman TM, Keenan JD, Doan T, Oldenburg CE
• Comparison of CD4 Counts with Mycophenolate Mofetil versus Methotrexate from the First-line Antimetabolites as Steroid-sparing Treatment (FAST) Uveitis Trial.
  Ocular immunology and inflammation 2020 Kong CL, Kelly NK, Sundararajan M, Rathinam SR, Gonzales JA, Thundikandy R, Vedhanayaki R, Kanakath A, Murugan B, Doan T, Goldstein D, Al-Dhibi HA, Acharya NR
• Evaluation of Metagenomic Deep Sequencing as a Diagnostic Test for Infectious Keratitis.
  Ophthalmology 2020 Lalitha P, Prajna NV, Sikha M, Gunasekaran R, Hinterwirth A, Worden L, Chen C, Zhong L, Liu Z, Lietman TM, Seitzman GD, Doan T
• Rigorous Randomized Controlled Trial Implementation in the Era of COVID-19.
  The American journal of tropical medicine and hygiene 2020 Oldenburg CE, Doan T
• No Time for Tears.
  Ophthalmology 2020 Seitzman GD, Doan T
• Post-antibiotic Ocular Surface Microbiome in Children: A Cluster-Randomized Trial.
  Ophthalmology 2020 Doan T, Hinterwirth A, Worden L, Arzika AM, Maliki R, Chen C, Zhong L, Zhou Z, Acharya NR, Porco TC, Keenan JD, Lietman TM
• Gut Resistome After Oral Antibiotics in Preschool Children in Burkina Faso: A Randomized, Controlled Trial.
  Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2020 Oldenburg CE, Hinterwirth A, Sié A, Coulibaly B, Ouermi L, Dah C, Tapsoba C, Cummings SL, Zhong L, Chen C, Sarkar S, Bärnighausen T, Lietman TM, Keenan JD, Doan T
• A double masked randomised 4-week, placebo-controlled study in the USA, Thailand and Taiwan to compare the efficacy of oral valganciclovir and topical 2% ganciclovir in the treatment of cytomegalovirus anterior uveitis: study protocol.
  BMJ open 2019 Takhar JS, Joye AS, Somkijrungroj T, Laovirojjanakul W, Lin CP, Lietman TM, Porco TC, Keenan JD, Gebreegziabher EA, Seitzman GD, Rose-Nussbaumer J, Doan TA, Acharya NR, Gonzales JA
• A double-masked placebo-controlled trial of azithromycin to prevent child mortality in Burkina Faso, West Africa: Community Health with Azithromycin Trial (CHAT) study protocol.
  Trials 2019 Sié A, Ouattara M, Bountogo M, Bagagnan C, Coulibaly B, Boudo V, Lebas E, Brogdon JM, Lin Y, Bärnighausen T, Porco TC, Doan T, Lietman TM, Oldenburg CE, Étude CHAT Study Group
• Macrolide Resistance and Longer-Term Assessment of Azithromycin in MORDOR I. Reply.
  The New England journal of medicine 2019 Lietman TM, Doan T, Keenan JD
• Metagenomic Next-Generation Sequencing for Identification and Quantitation of Transplant-Related DNA Viruses.
  Journal of clinical microbiology 2019 Carpenter ML, Tan SK, Watson T, Bacher R, Nagesh V, Watts A, Bentley G, Weber J, Huang C, Sahoo MK, Hinterwirth A, Doan T, Carter T, Dong Q, Gourguechon S, Harness E, Kermes S, Radhakrishnan S, Wang G…
• Clinical Course of Preexisting Uveitis during Treatment of Lung Cancer with Durvalumab.
  Ocular immunology and inflammation 2019 Ahmad TR, Doan T, Gonzales JA, Acharya NR, Tsui E
• Infectious corneal ulceration: a proposal for neglected tropical disease status.
  Bulletin of the World Health Organization 2019 Ung L, Acharya NR, Agarwal T, Alfonso EC, Bagga B, Bispo PJ, Burton MJ, Dart JK, Doan T, Fleiszig SM, Garg P, Gilmore MS, Gritz DC, Hazlett LD, Iovieno A, Jhanji V, Kempen JH, Lee CS, Lietman TM, …
• Primary vitreoretinal lymphoma: empowering our clinical suspicion.
  Current opinion in ophthalmology 2019 Takhar JS, Doan TA, Gonzales JA
• Clinical metagenomics for infectious corneal ulcers: Rags to riches?
  The ocular surface 2019 Ung L, Bispo PJM, Doan T, Van Gelder RN, Gilmore MS, Lietman T, Margolis TP, Zegans ME, Lee CS, Chodosh J
• Letermovir for the Management of Cytomegalovirus-associated Uveitis.
  Ocular immunology and inflammation 2019 Tsui E, Gonzales JA, Shantha JG, Acharya N, Doan T
• High-throughput sequencing of pooled samples to determine community-level microbiome diversity.
  Annals of epidemiology 2019 Ray KJ, Cotter SY, Arzika AM, Kim J, Boubacar N, Zhou Z, Zhong L, Porco TC, Keenan JD, Lietman TM, Doan T
• Effect of Corticosteroid-Sparing Treatment With Mycophenolate Mofetil vs Methotrexate on Inflammation in Patients With Uveitis: A Randomized Clinical Trial.
  JAMA 2019 Rathinam SR, Gonzales JA, Thundikandy R, Kanakath A, Murugan SB, Vedhanayaki R, Lim LL, Suhler EB, Al-Dhibi HA, Doan T, Keenan JD, Rao MM, Ebert CD, Nguyen HH, Kim E, Porco TC, Acharya NR, FAST …
• Neonatal azithromycin administration to prevent infant mortality: study protocol for a randomised controlled trial.
  BMJ open 2019 Sie A, Bountogo M, Nebie E, Ouattara M, Coulibaly B, Bagagnan C, Zabre P, Lebas E, Brogdon J, Godwin WW, Lin Y, Porco T, Doan T, Lietman TM, Oldenburg CE, NAITRE Study Group
• Gut microbiome alteration in MORDOR I: a community-randomized trial of mass azithromycin distribution.
  Nature medicine 2019 Doan T, Hinterwirth A, Worden L, Arzika AM, Maliki R, Abdou A, Kane S, Zhong L, Cummings ME, Sakar S, Chen C, Cook C, Lebas E, Chow ED, Nachamkin I, Porco TC, Keenan JD, Lietman TM
• When to Consider Bisphosphonates in Patients on Steroids for Chronic Ocular Inflammatory Conditions.
  Journal of ocular pharmacology and therapeutics : the official journal of the Association for Ocular Pharmacology and Therapeutics 2019 Takhar JS, Pawar VK, Marneris AG, Doan TA, Acharya NR, Gonzales JA
• Metagenomic Deep Sequencing for the Diagnosis of Corneal and External Disease Infections.
  Ophthalmology 2019 Seitzman GD, Hinterwirth A, Zhong L, Cummings ME, Chen C, Driver TH, Lee MD, Doan T
• Time Trade-off Utility Values in Noninfectious Uveitis.
  American journal of ophthalmology 2019 Niemeyer KM, Gonzales JA, Doan T, Browne EN, Rao MM, Acharya NR
• Longer-Term Assessment of Azithromycin for Reducing Childhood Mortality in Africa.
  The New England journal of medicine 2019 Keenan JD, Arzika AM, Maliki R, Boubacar N, Elh Adamou S, Moussa Ali M, Cook C, Lebas E, Lin Y, Ray KJ, O'Brien KS, Doan T, Oldenburg CE, Callahan EK, Emerson PM, Porco TC, Lietman TM
• Macrolide Resistance in MORDOR I - A Cluster-Randomized Trial in Niger.
  The New England journal of medicine 2019 Doan T, Arzika AM, Hinterwirth A, Maliki R, Zhong L, Cummings S, Sarkar S, Chen C, Porco TC, Keenan JD, Lietman TM, MORDOR Study Group
• Antibiotic Prescription Patterns among Children Younger than 5 Years in Nouna District, Burkina Faso.
  The American journal of tropical medicine and hygiene 2019 Sié A, Coulibaly B, Adama S, Ouermi L, Dah C, Tapsoba C, Bärnighausen T, Kelly JD, Doan T, Lietman TM, Keenan JD, Oldenburg CE
• Unbiased Pathogen Detection and Host Gene Profiling for Conjunctivitis.
  Ophthalmology 2019 Lalitha P, Seitzman GD, Kotecha R, Hinterwirth A, Chen C, Zhong L, Cummings ME, Lebas E, Sahoo MK, Pinsky BA, Lietman TM, Doan T
• Association of Ocular Inflammation and Rubella Virus Persistence.
  JAMA ophthalmology 2019 Gonzales JA, Hinterwirth A, Shantha J, Wang K, Zhong L, Cummings M, Qian Y, Wilson MR, Acharya NR, Doan T
• Indirect Effect of Azithromycin Use on the Intestinal Microbiome Diversity of Untreated Children: A Randomized Trial.
  Open forum infectious diseases 2019 Oldenburg CE, Sié A, Coulibaly B, Ouermi L, Dah C, Tapsoba C, Bärnighausen T, Lebas E, Arzika AM, Cummings S, Zhong L, Lietman TM, Keenan JD, Doan T
• Association Between Noninfectious Uveitis and Psychological Stress.
  JAMA ophthalmology 2019 Berlinberg EJ, Gonzales JA, Doan T, Acharya NR
• Capnocytophaga Keratitis: Clinical Presentation and Use of Metagenomic Deep Sequencing for Diagnosis.
  Cornea 2019 Seitzman GD, Thulasi P, Hinterwirth A, Chen C, Shantha J, Doan T
• Dual-target, real-time PCR for the diagnosis of intraocular Toxoplasma gondii infections.
  The British journal of ophthalmology 2019 Gomez CA, Sahoo MK, Kahn GY, Zhong L, Montoya JG, Pinsky BA, Doan T
• Effect of Commonly Used Pediatric Antibiotics on Gut Microbial Diversity in Preschool Children in Burkina Faso: A Randomized Clinical Trial.
  Open forum infectious diseases 2018 Oldenburg CE, Sié A, Coulibaly B, Ouermi L, Dah C, Tapsoba C, Bärnighausen T, Ray KJ, Zhong L, Cummings S, Lebas E, Lietman TM, Keenan JD, Doan T
• CYTOMEGALOVIRUS RETINITIS ASSOCIATED WITH OCCLUSIVE VASCULOPATHY IN AN ELDERLY, HUMAN IMMUNODEFICIENCY VIRUS-NEGATIVE MAN.
  Retinal cases & brief reports 2018 Moussa K, Doan T, Stewart JM, Shantha J, Gonzales J, Acharya N, Cunningham ET
• Diversity of Chlamydia trachomatis in Trachoma-Hyperendemic Communities Treated With Azithromycin.
  American journal of epidemiology 2018 Chin SA, Morberg DP, Alemayehu W, Melese M, Lakew T, Chen MC, Zhou Z, Doan T, Cevallos V, Lietman TM, Keenan JD
• Mass Azithromycin Distribution and Community Microbiome: A Cluster-Randomized Trial.
  Open forum infectious diseases 2018 Doan T, Hinterwirth A, Arzika AM, Cotter SY, Ray KJ, O'Brien KS, Zhong L, Chow ED, Zhou Z, Cummings SL, Fry D, Oldenburg CE, Worden L, Porco TC, Keenan JD, Lietman TM
• Metagenomic deep sequencing of aqueous fluid detects intraocular lymphomas.
  The British journal of ophthalmology 2017 Gonzales J, Doan T, Shantha JG, Bloomer M, Wilson MR, DeRisi JL, Acharya N
• Metagenomic DNA Sequencing for the Diagnosis of Intraocular Infections.
  Ophthalmology 2017 Doan T, Acharya NR, Pinsky BA, Sahoo MK, Chow ED, Banaei N, Budvytiene I, Cevallos V, Zhong L, Zhou Z, Lietman TM, DeRisi JL
• Gut Microbial Diversity in Antibiotic-Naive Children After Systemic Antibiotic Exposure: A Randomized Controlled Trial.
  Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2017 Doan T, Arzika AM, Ray KJ, Cotter SY, Kim J, Maliki R, Zhong L, Zhou Z, Porco TC, Vanderschelden B, Keenan JD, Lietman TM
• Current and future molecular diagnostics for ocular infectious diseases.
  Current opinion in ophthalmology 2016 Doan T, Pinsky BA
• Paucibacterial Microbiome and Resident DNA Virome of the Healthy Conjunctiva.
  Investigative ophthalmology & visual science 2016 Doan T, Akileswaran L, Andersen D, Johnson B, Ko N, Shrestha A, Shestopalov V, Lee CS, Lee AY, Van Gelder RN
• Illuminating uveitis: metagenomic deep sequencing identifies common and rare pathogens.
  Genome medicine 2016 Doan T, Wilson MR, Crawford ED, Chow ED, Khan LM, Knopp KA, O'Donovan BD, Xia D, Hacker JK, Stewart JM, Gonzales JA, Acharya NR, DeRisi JL
• C-terminal threonines and serines play distinct roles in the desensitization of rhodopsin, a G protein-coupled receptor.
  eLife 2015 Azevedo AW, Doan T, Moaven H, Sokal I, Baameur F, Vishnivetskiy SA, Homan KT, Tesmer JJ, Gurevich VV, Chen J, Rieke F
• Retinal neovascularization and endogenous fungal endophthalmitis in intravenous drug users.
  Ophthalmology 2014 Doan T, Vemulakonda GA, Choi D, Keene CD, Akileswaran L, Van Gelder RN, Chao JR
• A woman with bilateral maculopathy and acquired vitamin B12 deficiency.
  Eye (London, England) 2014 Doan T, Chao JR
• Dorsolateral midbrain MRI abnormalities and ocular motor deficits following cytarabine-based chemotherapy for acute myelogenous leukemia.
  Journal of neuro-ophthalmology : the official journal of the North American Neuro-Ophthalmology Society 2011 Doan T, Lacayo N, Fisher PG, Liao YJ
• Arrestin competition influences the kinetics and variability of the single-photon responses of mammalian rod photoreceptors.
  The Journal of neuroscience : the official journal of the Society for Neuroscience 2009 Doan T, Azevedo AW, Hurley JB, Rieke F
• Deletion of PrBP/delta impedes transport of GRK1 and PDE6 catalytic subunits to photoreceptor outer segments.
  Proceedings of the National Academy of Sciences of the United States of America 2007 Zhang H, Li S, Doan T, Rieke F, Detwiler PB, Frederick JM, Baehr W
• Multiple phosphorylation sites confer reproducibility of the rod's single-photon responses.
  Science (New York, N.Y.) 2006 Doan T, Mendez A, Detwiler PB, Chen J, Rieke F
• Scotopic visual signaling in the mouse retina is modulated by high-affinity plasma membrane calcium extrusion.
  The Journal of neuroscience : the official journal of the Society for Neuroscience 2006 Duncan JL, Yang H, Doan T, Silverstein RS, Murphy GJ, Nune G, Liu X, Copenhagen D, Tempel BL, Rieke F, Krizaj D
• Controlling the gain of rod-mediated signals in the Mammalian retina.
  The Journal of neuroscience : the official journal of the Society for Neuroscience 2006 Dunn FA, Doan T, Sampath AP, Rieke F
• Pharmacological and rAAV gene therapy rescue of visual functions in a blind mouse model of Leber congenital amaurosis.
  PLoS medicine 2005 Batten ML, Imanishi Y, Tu DC, Doan T, Zhu L, Pang J, Glushakova L, Moise AR, Baehr W, Van Gelder RN, Hauswirth WW, Rieke F, Palczewski K
• Polarized light detection in spiders.
  The Journal of experimental biology 2001 Dacke M, Doan TA, O'Carroll DC