Thomas Dalhuisen, MS
Statistician & Data Scientist
Medicine
School of Medicine

Education & Training

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• MScR Population Biology The University of Edinburgh 07/2023
• MScR Infectious Disease & Global Health The University of Edinburgh 10/2020
• BSc (Hons) Biomedical Sciences & Infectious Disease The University of Edinburgh 05/2019
• Immunology & Microbiology The University of British Columbia 05/2018

Publications (19)

Top publication keywords:
MammalsPolyubiquitinRibosomal ProteinsLymphocyte ActivationRNA, ViralAIDS VaccinesMagnoliopsidaSexual and Gender MinoritiesNetherlandsPlasmodiumSmallpox VaccineImmunotherapyUbiquitinGammaproteobacteriaAntigens, Viral

• Autoantibodies neutralizing type 1 interferons in two cohorts of people with HIV.
  Journal of human immunity 2026 Jensen JA, Mørk N, Tolstrup M, Søgaard O, Dalhuisen T, Rodriguez A, Hoh R, Peluso MJ, Deeks SG, Casanova JL, Mogensen TH
• Machine Learning Analysis of Post-Acute COVID Symptoms Identifies Distinct Clusters, Severity Groups, and Trajectories.
  medRxiv : the preprint server for health sciences 2025 Peng B, Dalhuisen T, Rogers A, Capric V, Davies HE, Deeks SG, Dupont CL, Estevez J, Freire M, Haddad NS, Jones SA, Kelly JD, Ladell K, Lee FE, Martin JN, Miners KL, Peluso MJ, Price DA, Proal AD, …
• Inhibitory potential of autologous neutralizing antibodies sets quantitative limits on the rebound-competent HIV-1 reservoir.
  bioRxiv : the preprint server for biology 2025 Garcia MA, Farrell-Sherman A, Zhuo J, Fray E, Zinsser AM, Aydin B, Sowers K, Lai J, Li H, Lopez BM, Abeyta-Lopez A, Chu T, Lubbeck D, Chae M, Varriale J, Westfall DH, Hoh R, Dalhuisen T, Simonetti FR,…
• Correlates of HIV-1 control after combination immunotherapy.
  Nature 2025 Peluso MJ, Sandel DA, Deitchman AN, Kim SJ, Dalhuisen T, Tummala HP, Tibúrcio R, Zemelko L, Borgo GM, Singh SS, Schwartz K, Deswal M, Williams MC, Hoh R, Shimoda M, Narpala S, Serebryannyy L, Khalili …
• Increased mannosylation of extracellular vesicles in Long COVID plasma provides a potential therapeutic target for Galanthus nivalis agglutinin (GNA) affinity resin.
  bioRxiv : the preprint server for biology 2025 Pesqueira Sanchez MA, de Necochea Campion R, Dalhuisen T, Fehrman EA, Chhabra PS, Kelly JD, Martin JN, Deeks SG, Henrich TJ, Peluso MJ, LaRosa SP

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• Persistent immune dysregulation and metabolic alterations following SARS-CoV-2 infection.
  medRxiv : the preprint server for health sciences 2025 Lage SL, Bricker-Holt K, Rocco JM, Rupert A, Donovan FX, Abramzon YA, Chandrasekharappa SC, McNinch C, Cook L, Amaral EP, Rosenfeld G, Dalhuisen T, Eun A, Hoh R, Fehrman E, Martin JN, Deeks SG, …
• Combination immunotherapy induces post-intervention control of HIV.
  Research square 2025 Peluso MJ, Sandel DA, Deitchman AN, Kim SJ, Dalhuisen T, Tummala HP, Tibúrcio R, Zemelko L, Borgo GM, Singh SS, Schwartz K, Deswal M, Williams MC, Hoh R, Shimoda M, Narpala S, Serebryannyy L, Khalili …
• Long COVID is associated with lower percentages of mature, cytotoxic NK cell phenotypes.
  The Journal of clinical investigation 2024 Tsao T, Buck AM, Grimbert L, LaFranchi BH, Altamirano Poblano B, Fehrman EA, Dalhuisen T, Hsue PY, Kelly JD, Martin JN, Deeks SG, Hunt PW, Peluso MJ, Aguilar OA, Henrich TJ
• Post-SARS-CoV-2 Onset Myalgic Encephalomyelitis/Chronic Fatigue Syndrome Symptoms in Two Cohort Studies of COVID-19 Recovery.
  medRxiv : the preprint server for health sciences 2024 Jamal A, Dalhuisen T, Gallego Márquez N, Dziarski AD, Uy J, Walch SN, Thomas SA, Fehrman EA, Romero AE, Zelaya AS, Akasreku EA, Adeagbo TV, Pasetes EC, Akbas SY, Azola AM, Deeks SG, Kelly JD, Martin …
• Tissue-based T cell activation and viral RNA persist for up to 2 years after SARS-CoV-2 infection.
  Science translational medicine 2024 Peluso MJ, Ryder D, Flavell RR, Wang Y, Levi J, LaFranchi BH, Deveau TM, Buck AM, Munter SE, Asare KA, Aslam M, Koch W, Szabo G, Hoh R, Deswal M, Rodriguez AE, Buitrago M, Tai V, Shrestha U, Lu S, …
• Plasma-based antigen persistence in the post-acute phase of COVID-19.
  The Lancet. Infectious diseases 2024 Peluso MJ, Swank ZN, Goldberg SA, Lu S, Dalhuisen T, Borberg E, Senussi Y, Luna MA, Chang Song C, Clark A, Zamora A, Lew M, Viswanathan B, Huang B, Anglin K, Hoh R, Hsue PY, Durstenfeld MS, Spinelli …
• Plasma-based antigen persistence in the post-acute phase of SARS-CoV-2 infection.
  medRxiv : the preprint server for health sciences 2023 Peluso MJ, Swank ZN, Goldberg SA, Lu S, Dalhuisen T, Borberg E, Senussi Y, Luna MA, Song CC, Clark A, Zamora A, Lew M, Viswanathan B, Huang B, Anglin K, Hoh R, Hsue PY, Durstenfeld MS, Spinelli MA, …
• Unusually Divergent Ubiquitin Genes and Proteins in Plasmodium Species.
  Genome biology and evolution 2023 Dalhuisen T, Plenderleith LJ, Ursani I, Philip N, Hahn BH, Sharp PM
• Multimodal Molecular Imaging Reveals Tissue-Based T Cell Activation and Viral RNA Persistence for Up to 2 Years Following COVID-19.
  medRxiv : the preprint server for health sciences 2023 Peluso MJ, Ryder D, Flavell R, Wang Y, Levi J, LaFranchi BH, Deveau TM, Buck AM, Munter SE, Asare KA, Aslam M, Koch W, Szabo G, Hoh R, Deswal M, Rodriguez A, Buitrago M, Tai V, Shrestha U, Lu S, …
• The daily updated Dutch national database on COVID-19 epidemiology, vaccination and sewage surveillance.
  Scientific data 2023 Geubbels ELPE, Backer JA, Bakhshi-Raiez F, van der Beek RFHJ, van Benthem BHB, van den Boogaard J, Broekman EH, Dongelmans DA, Eggink D, van Gaalen RD, van Gageldonk A, Hahné S, Hajji K, Hofhuis A, …
• Number of COVID-19 hospitalisations averted by vaccination: Estimates for the Netherlands, January 6, 2021 through August 30, 2022.
  Vaccine 2023 van Iersel SCJL, McDonald SA, de Gier B, Knol MJ, de Melker HE, Henri van Werkhoven CH, Hahné SJM, RIVM COVID-19 epidemiology and surveillance team
• Mpox outbreak in the Netherlands, 2022: public health response, characteristics of the first 1,000 cases and protection of the first-generation smallpox vaccine.
  Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin 2023 van Ewijk CE, Miura F, van Rijckevorsel G, de Vries HJ, Welkers MR, van den Berg OE, Friesema IH, van den Berg PR, Dalhuisen T, Wallinga J, Brandwagt D, van Cleef BA, Vennema H, Voordouw B, Koopmans M…
• Empirical evidence of transmission over a school-household network for SARS-CoV-2; exploration of transmission pairs stratified by primary and secondary school.
  Epidemics 2023 van Iersel SCJL, Backer JA, van Gaalen RD, Andeweg SP, Munday JD, Wallinga J, van Hoek AJ, RIVM COVID-19 epidemiology and surveillance group
• Discovery of lignin-transforming bacteria and enzymes in thermophilic environments using stable isotope probing.
  The ISME journal 2022 Levy-Booth DJ, Navas LE, Fetherolf MM, Liu LY, Dalhuisen T, Renneckar S, Eltis LD, Mohn WW