Shan Dong, PhD
Specialist
Psychiatry
School of Medicine

Education & Training

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• Ph.D Bioinformatics Peking University 07/2015
• ASD Genetics, Bioinformatics Yale University 09/2013
• B.Eng Bioinformatics Tongji University 07/2010

Publications (17)

Top publication keywords:
INDEL MutationTourette SyndromeWhole Genome SequencingPedigreeHernias, Diaphragmatic, CongenitalWT1 ProteinsBiological PsychiatryFrameshift MutationProtein Tyrosine Phosphatase, Non-Receptor Type 11Sequence DeletionChild Development Disorders, PervasiveAutism Spectrum DisorderCadherinsReceptors, Cell SurfaceCOUP Transcription Factor II

• Exome sequencing of fetuses with congenital diaphragmatic hernia supports a causal role for NR2F2, PTPN11, and WT1 variants.
  American journal of surgery 2021 Schwab ME, Dong S, Lianoglou BR, Aguilar Lucero AF, Schwartz GB, Norton ME, MacKenzie TC, Sanders SJ
• Prenatal exposure to paternal smoking and likelihood for autism spectrum disorder.
  Autism : the international journal of research and practice 2021 Kim B, Ha M, Kim YS, Koh YJ, Dong S, Kwon HJ, Kim YS, Lim MH, Paik KC, Yoo SJ, Kim H, Hong PS, Sanders SJ, Leventhal BL
• Whole-Exome Sequencing in Fetuses with Congenital Diaphragmatic Hernias: Known and Novel Genetic Mutation
  Journal of the American College of Surgeons 2020 Marisa E. Schwab, Shan Dong, Stephan J. Sanders, Tippi C. MacKenzie
• Whole-Genome and RNA Sequencing Reveal Variation and Transcriptomic Coordination in the Developing Human Prefrontal Cortex.
  Cell reports 2020 Werling DM, Pochareddy S, Choi J, An JY, Sheppard B, Peng M, Li Z, Dastmalchi C, Santpere G, Sousa AMM, Tebbenkamp ATN, Kaur N, Gulden FO, Breen MS, Liang L, Gilson MC, Zhao X, Dong S, Klei L, Cicek …
• Genome-wide de novo risk score implicates promoter variation in autism spectrum disorder.
  Science (New York, N.Y.) 2018 An JY, Lin K, Zhu L, Werling DM, Dong S, Brand H, Wang HZ, Zhao X, Schwartz GB, Collins RL, Currall BB, Dastmalchi C, Dea J, Duhn C, Gilson MC, Klei L, Liang L, Markenscoff-Papadimitriou E, Pochareddy…

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• De Novo Sequence and Copy Number Variants Are Strongly Associated with Tourette Disorder and Implicate Cell Polarity in Pathogenesis.
  Cell reports 2018 Wang S, Mandell JD, Kumar Y, Sun N, Morris MT, Arbelaez J, Nasello C, Dong S, Duhn C, Zhao X, Yang Z, Padmanabhuni SS, Yu D, King RA, Dietrich A, Khalifa N, Dahl N, Huang AY, Neale BM, Coppola G, …
• Publisher Correction: Whole genome sequencing in psychiatric disorders: the WGSPD consortium.
  Nature neuroscience 2018 Sanders SJ, Neale BM, Huang H, Werling DM, An JY, Dong S, Abecasis G, Arguello PA, Blangero J, Boehnke M, Daly MJ, Eggan K, Geschwind DH, Glahn DC, Goldstein DB, Gur RE, Handsaker RE, McCarroll SA, …
• An analytical framework for whole-genome sequence association studies and its implications for autism spectrum disorder.
  Nature genetics 2018 Werling DM, Brand H, An JY, Stone MR, Zhu L, Glessner JT, Collins RL, Dong S, Layer RM, Markenscoff-Papadimitriou E, Farrell A, Schwartz GB, Wang HZ, Currall BB, Zhao X, Dea J, Duhn C, Erdman CA, …
• Whole genome sequencing in psychiatric disorders: the WGSPD consortium.
  Nature neuroscience 2017 Sanders SJ, Neale BM, Huang H, Werling DM, An JY, Dong S, Whole Genome Sequencing for Psychiatric Disorders (WGSPD), Abecasis G, Arguello PA, Blangero J, Boehnke M, Daly MJ, Eggan K, Geschwind DH, …
• De Novo Coding Variants Are Strongly Associated with Tourette Disorder.
  Neuron 2017 Willsey AJ, Fernandez TV, Yu D, King RA, Dietrich A, Xing J, Sanders SJ, Mandell JD, Huang AY, Richer P, Smith L, Dong S, Samocha KE, Tourette International Collaborative Genetics (TIC Genetics), …
• Insights into Autism Spectrum Disorder Genomic Architecture and Biology from 71 Risk Loci.
  Neuron 2015 Sanders SJ, He X, Willsey AJ, Ercan-Sencicek AG, Samocha KE, Cicek AE, Murtha MT, Bal VH, Bishop SL, Dong S, Goldberg AP, Jinlu C, Keaney JF, Klei L, Mandell JD, Moreno-De-Luca D, Poultney CS, …
• The female protective effect in autism spectrum disorder is not mediated by a single genetic locus.
  Molecular autism 2015 Gockley J, Willsey AJ, Dong S, Dougherty JD, Constantino JN, Sanders SJ
• The contribution of de novo coding mutations to autism spectrum disorder.
  Nature 2014 Iossifov I, O'Roak BJ, Sanders SJ, Ronemus M, Krumm N, Levy D, Stessman HA, Witherspoon KT, Vives L, Patterson KE, Smith JD, Paeper B, Nickerson DA, Dea J, Dong S, Gonzalez LE, Mandell JD, Mane SM, …
• De novo insertions and deletions of predominantly paternal origin are associated with autism spectrum disorder.
  Cell reports 2014 Dong S, Walker MF, Carriero NJ, DiCola M, Willsey AJ, Ye AY, Waqar Z, Gonzalez LE, Overton JD, Frahm S, Keaney JF, Teran NA, Dea J, Mandell JD, Hus Bal V, Sullivan CA, DiLullo NM, Khalil RO, Gockley J…
• Coexpression networks implicate human midfetal deep cortical projection neurons in the pathogenesis of autism.
  Cell 2013 Willsey AJ, Sanders SJ, Li M, Dong S, Tebbenkamp AT, Muhle RA, Reilly SK, Lin L, Fertuzinhos S, Miller JA, Murtha MT, Bichsel C, Niu W, Cotney J, Ercan-Sencicek AG, Gockley J, Gupta AR, Han W, He X, …
• H2A.Z nucleosome positioning has no impact on genetic variation in Drosophila genome.
  PloS one 2013 Tang Y, Dong S, Cao X, Zhou Q, Ding G, Jiang C
• KOBAS 2.0: a web server for annotation and identification of enriched pathways and diseases.
  Nucleic acids research 2011 Xie C, Mao X, Huang J, Ding Y, Wu J, Dong S, Kong L, Gao G, Li CY, Wei L