Ranya Virk, PhD
Postdoctoral Scholar
Pharmaceutical Chemistry
School of Pharmacy

Publications (11)

Top publication keywords:
Cell Line, TumorMicroscopyGenomeConstrictionTranscription, GeneticGene Expression Regulation, NeoplasticMicroscopy, Electron, Scanning TransmissionImaging, Three-DimensionalChromosomesModels, BiologicalAdaptation, PhysiologicalOsteogenesisSurvival AnalysisMacromolecular SubstancesChromatin

• Chromatin reprogramming and bone regeneration in vitro and in vivo via the microtopography-induced constriction of cell nuclei.
  Nature biomedical engineering 2023 Wang X, Agrawal V, Dunton CL, Liu Y, Virk RKA, Patel PA, Carter L, Pujadas EM, Li Y, Jain S, Wang H, Ni N, Tsai HM, Rivera-Bolanos N, Frederick J, Roth E, Bleher R, Duan C, Ntziachristos P, He TC, …
• Multiscale genome organization symposium - annual biophysical society meeting 2023.
  Biophysical reviews 2023 Akbari E, Park EJ, Singh AK, Vinayak V, Virk RKA, Wereszczynksi J, Musselman CA
• Author Correction: Lipid exposure activates gene expression changes associated with estrogen receptor negative breast cancer.
  NPJ breast cancer 2023 Yadav S, Virk R, Chung CH, Eduardo MB, VanDerway D, Chen D, Burdett K, Gao H, Zeng Z, Ranjan M, Cottone G, Xuei X, Chandrasekaran S, Backman V, Chatterton R, Khan SA, Clare SE
• Author Correction: Analysis of three-dimensional chromatin packing domains by chromatin scanning transmission electron microscopy (ChromSTEM).
  Scientific reports 2022 Li Y, Agrawal V, Virk RKA, Roth E, Li WS, Eshein A, Frederick J, Huang K, Almassalha L, Bleher R, Carignano MA, Szleifer I, Dravid VP, Backman V
• Analysis of three-dimensional chromatin packing domains by chromatin scanning transmission electron microscopy (ChromSTEM).
  Scientific reports 2022 Li Y, Agrawal V, Virk RKA, Roth E, Li WS, Eshein A, Frederick J, Huang K, Almassalha L, Bleher R, Carignano MA, Szleifer I, Dravid VP, Backman V

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• Development of a Low-Cost, Easy-to-Adopt Diversity, Equity, and Inclusion Program During Crisis.
  Biomedical engineering education 2022 Ankeny CJ, Dunton C, Virk R, Scott E, Kamat N
• Lipid exposure activates gene expression changes associated with estrogen receptor negative breast cancer.
  NPJ breast cancer 2022 Yadav S, Virk R, Chung CH, Eduardo MB, VanDerway D, Chen D, Burdett K, Gao H, Zeng Z, Ranjan M, Cottone G, Xuei X, Chandrasekaran S, Backman V, Chatterton R, Khan SA, Clare SE
• Nanoscale chromatin imaging and analysis platform bridges 4D chromatin organization with molecular function.
  Science advances 2021 Li Y, Eshein A, Virk RKA, Eid A, Wu W, Frederick J, VanDerway D, Gladstein S, Huang K, Shim AR, Anthony NM, Bauer GM, Zhou X, Agrawal V, Pujadas EM, Jain S, Esteve G, Chandler JE, Nguyen TQ, Bleher R,…
• Characterizing chromatin packing scaling in whole nuclei using interferometric microscopy.
  Optics letters 2020 Eid A, Eshein A, Li Y, Virk R, Van Derway D, Zhang D, Taflove A, Backman V
• Physical and data structure of 3D genome.
  Science advances 2020 Huang K, Li Y, Shim AR, Virk RKA, Agrawal V, Eshein A, Nap RJ, Almassalha LM, Backman V, Szleifer I
• Disordered chromatin packing regulates phenotypic plasticity.
  Science advances 2020 Virk RKA, Wu W, Almassalha LM, Bauer GM, Li Y, VanDerway D, Frederick J, Zhang D, Eshein A, Roy HK, Szleifer I, Backman V