Pratik Mukherjee, MD, PhD
Professor
Radiology
School of Medicine

Dr. Mukherjee received his PhD in Neuroscience from Rockefeller University, New York in 1994 and his MD from Cornell University, New York, in 1995. He completed his internship in Internal Medicine at New York Hospital - Cornell Medical Center, followed by a residency in Radiology and fellowship in Neuroradiology at Washington University Medical Center in St. Louis, Missouri, completed in 2002.

Dr. Mukherjee’s primary clinical research is the study of neurodevelopmental disorders and traumatic brain injury (TBI) using advanced MRI. His research has been focused on technical development, neuroscience and clinical applications of advanced imaging methods for mapping structure and function of the human brain, especially diffusion MRI, which is a popular technique for assessing the development and integrity of white matter and for mapping axonal fiber pathways.

Dr. Mukherjee has served as Principal Investigator or Co-Principal Investigator for several NIH grants. His work has also been funded by grants from the Dept. of Defense, the Simons Foundation, McDonnell Foundation, Dana Foundation, Wallace Research Foundation, GE Healthcare and the GE-NFL Head Health Initiative. He has published over 80 peer-reviewed papers.

Expertise: Radiology, Neuroradiology, Pediatric Neuroradiology, Cognitive Neuroscience, Computational Neuroscience

Specialty: Neuroradiology, traumatic brain injury (TBI), neurodevelopmental disorders

Professional Interests: Brain development, computational neuroscience, connectomics, diffusion tensor imaging (DTI), epilepsy, functional MRI (fMRI), machine learning, magnetoencephalography (MEG), pediatric neuroradiology, traumatic brain injury (TBI), ultra-high field MRI, white matter tractography

Education and Training:

• Medical School: Cornell University, New York - Medicine
• Internship: New York Cornell Medical Center - Internal Medicine
• Residency: Washington University of Medical Center, St. Louis, Missouri - Radiology
• Fellowship: Washington University Medical Center, St. Louis, Missouri - Neuroradiology
• Doctor of Philosophy: Rockefeller University, New York - Neuroscience
• National Board of Medical Examiners Certificate
• American Board of Radiology Certificate
• Missouri Medical License
• California Medical License
• American Board of Radiology Certificate of Added Qualification Neuroradiology

• Goal-Oriented Attentional Self-Regulation Training in Chronic Mild Traumatic Brain Injury is Linked to Microstructural Plasticity in Prefrontal White Matter.
  Journal of neurotrauma 2024 Karbasforoushan H, Wren-Jarvis J, Hwang A, Santiago R, Raptentsetsang S, Cai LT, Xiao J, Maruyama BA, Abrams GM, Novakovic-Agopian T, Mukherjee P
• Clinical profile of patients with acute traumatic brain injury undergoing cranial surgery in the United States: report from the 18-centre TRACK-TBI cohort study.
  Lancet regional health. Americas 2024 Yue JK, Kanter JH, Barber JK, Huang MC, van Essen TA, Elguindy MM, Foreman B, Korley FK, Belton PJ, Pisica D, Lee YM, Kitagawa RS, Vassar MJ, Sun X, Satris GG, Wong JC, Ferguson AR, Huie JR, Wang KKW,…
• Correction: Common Data Elements for Disorders of Consciousness: Recommendations from the Working Group on Neuroimaging.
  Neurocritical care 2024 Edlow BL, Boerwinkle VL, Annen J, Boly M, Gosseries O, Laureys S, Mukherjee P, Puybasset L, Stevens RD, Threlkeld ZD, Newcombe VFJ, Fernandez-Espejo D, Curing Coma Campaign and its Contributing …
• Prior traumatic brain injury is a risk factor for in-hospital mortality in moderate to severe traumatic brain injury: a TRACK-TBI cohort study.
  Trauma surgery & acute care open 2024 Yue JK, Etemad LL, Elguindy MM, van Essen TA, Belton PJ, Nelson LD, McCrea MA, Vreeburg RJG, Gotthardt CJ, Tracey JX, Coskun BC, Krishnan N, Halabi C, Eagle SR, Korley FK, Robertson CS, Duhaime AC, …
• Standardized reporting for Head CT Scans in patients suspected of traumatic brain injury (TBI): An international expert endeavor.
  Neuroradiology 2024 Wintermark M, Allen JW, Anzai Y, Das T, Flanders AE, Galanaud D, Gean A, Haller S, Lv H, Hirvonen J, Jordan JE, Lee R, Lui YW, Sundgren PC, Mukherjee P, Moen KG, Muto M, Ng K, Niogi SN, Rovira A, de …
• Discovering the gene-brain-behavior link in autism via generative machine learning.
  Science advances 2024 Kundu S, Sair H, Sherr EH, Mukherjee P, Rohde GK
• Isolated Traumatic Subarachnoid Hemorrhage on Head Computed Tomography Scan May Not Be Isolated: A Transforming Research and Clinical Knowledge in Traumatic Brain Injury Study (TRACK-TBI) Study.
  Journal of neurotrauma 2024 Yue JK, Yuh EL, Elguindy MM, Sun X, van Essen TA, Deng H, Belton PJ, Satris GG, Wong JC, Valadka AB, Korley FK, Robertson CS, McCrea MA, Stein MB, Diaz-Arrastia R, Wang KKW, Temkin NR, DiGiorgio AM, …
• 176 Repetitive Traumatic Brain Injuries Are Associated With Poorer Outcomes at 1-Year and 3-7 Years After Index Injury.
  Neurosurgery 2024 John K. Yue, Leila Etemad, Jason Barber, Gabriela Satris, Patrick Belton, Debbie Madhok, Sabah Hamidi, Joye Tracey, Esther Yuh, Pratik Mukherjee, Michael C. Huang, Phiroz E. Tarapore, Ava Puccio, …
• 248 Isolated Traumatic Subarachnoid Hemorrhage on Head Computed Tomography Scan May Not Be Isolated.
  Neurosurgery 2024 John K. Yue, Esther Yuh, Mahmoud Elguindy, Xiaoying Sun, Thomas van Essen, Hansen Deng, Gabriela Satris, Justin Wong, Anthony Michael DiGiorgio, Phiroz E. Tarapore, Michael C. Huang, Amy Markowitz, …
• Association of Biomarkers of Neuronal Injury and Inflammation With Insomnia Trajectories After Traumatic Brain Injury: A TRACK-TBI Study.
  Neurology 2024 Werner JK, Albrecht J, Capaldi VF, Jain S, Sun X, Mukherjee P, Williams SG, Collen J, Diaz-Arrastia R, Manley GT, Krystal AD, Wickwire E, TRACK-TBI Investigators
• Performance of the IMPACT and CRASH prognostic models for traumatic brain injury in a contemporary multicenter cohort: a TRACK-TBI study.
  Journal of neurosurgery 2024 Yue JK, Lee YM, Sun X, van Essen TA, Elguindy MM, Belton PJ, Pisica D, Mikolic A, Deng H, Kanter JH, McCrea MA, Bodien YG, Satris GG, Wong JC, Ambati VS, Grandhi R, Puccio AM, Mukherjee P, Valadka AB,…
• Diagnostic Utility of Glial Fibrillary Acidic Protein Beyond 12 Hours After Traumatic Brain Injury: A TRACK-TBI Study.
  Journal of neurotrauma 2024 Puccio AM, Yue JK, Korley FK, Okonkwo DO, Diaz-Arrastia R, Yuh EL, Ferguson AR, Mukherjee P, Wang KKW, Taylor SR, Deng H, Markowitz AJ, Sun X, Jain S, Manley GT
• MaPPeRTrac: A Massively Parallel, Portable, and Reproducible Tractography Pipeline.
  Neuroinformatics 2024 Cai LT, Moon J, Camacho PB, Anderson AT, Chwa WJ, Sutton BP, Markowitz AJ, Palacios EM, Rodriguez A, Manley GT, Shankar S, Bremer PT, Mukherjee P, Madduri RK, TRACK-TBI Investigators
• Gray Matter Correlates of Attention Deficit Hyperactivity Disorder in Boys versus Girls with Sensory Processing Dysfunction.
  2024 Efstathios D. Gennatas, Jamie Wren-Jarvis, Rachel Powers, Maia C. Lazerwitz, Ioanna Bourla, Lanya T. Cai, Hannah L. Choi, Robyn Chu, Kaitlyn J. Trimarchi, Rafael D. Garcia, Elysa J. Marco, Pratik …
• White matter microstructure of children with sensory over-responsivity is associated with affective behavior.
  Journal of neurodevelopmental disorders 2024 Wren-Jarvis J, Powers R, Lazerwitz MC, Xiao J, Cai LT, Choi HL, Brandes-Aitken A, Chu R, Trimarchi KJ, Garcia RD, Rowe MA, Steele MC, Marco EJ, Mukherjee P
• Correction: Common Data Elements for Disorders of Consciousness: Recommendations from the Working Group on Neuroimaging.
  Neurocritical care 2023 Edlow BL, Boerwinkle VL, Annen J, Boly M, Gosseries O, Laureys S, Mukherjee P, Puybasset L, Stevens RD, Threlkeld ZD, Newcombe VFJ, Fernandez-Espejo D, and the Curing Coma Campaign and its …
• Autism spectrum disorder-specific changes in white matter connectome edge density based on functionally defined nodes.
  Frontiers in neuroscience 2023 Weber CF, Lake EMR, Haider SP, Mozayan A, Bobba PS, Mukherjee P, Scheinost D, Constable RT, Ment L, Payabvash S
• 26 Improvement in Executive Function Following Goal-Oriented Attentional Self-Regulation Training in Veterans with mTBI.
  Journal of the International Neuropsychological Society 2023 Rachel Santiago, Sky Raptentsetsang, Brian A Maruyama, Anna Hwang, Marissa Cassar, Gary Abrams, Pratik Mukherjee, Tatjana Novakovic-Agopian
• Association Between Insomnia and Mental Health and Neurocognitive Outcomes Following Traumatic Brain Injury.
  Journal of neurotrauma 2023 Wickwire EM, Albrecht JS, Capaldi VF, Jain S, Gardner RC, Smith MT, Williams SG, Collen J, Schnyer DM, Giacino JT, Nelson LD, Mukherjee P, Sun X, Werner JK, Mosti CB, Markowitz AJ, Manley GT, Krystal …
• Longitudinal Recovery Following Repetitive Traumatic Brain Injury.
  JAMA network open 2023 Etemad LL, Yue JK, Barber J, Nelson LD, Bodien YG, Satris GG, Belton PJ, Madhok DY, Huie JR, Hamidi S, Tracey JX, Coskun BC, Wong JC, Yuh EL, Mukherjee P, Markowitz AJ, Huang MC, Tarapore PE, …
• Common Data Elements for Disorders of Consciousness: Recommendations from the Working Group on Neuroimaging.
  Neurocritical care 2023 Edlow BL, Boerwinkle VL, Annen J, Boly M, Gosseries O, Laureys S, Mukherjee P, Puybasset L, Stevens RD, Threlkeld ZD, Newcombe VFJ, Fernandez-Espejo D, and the Curing Coma Campaign and its …
• Impact of postnatal weight gain on brain white matter maturation in very preterm infants.
  Journal of neuroimaging : official journal of the American Society of Neuroimaging 2023 Bobba PS, Weber CF, Higaki ARA, Mukherjee P, Scheinost D, Constable RT, Ment L, Taylor SN, Payabvash S
• Evaluation of major depressive disorder using 7 Tesla phase sensitive neuroimaging before and after mindfulness-based cognitive therapy.
  Journal of affective disorders 2023 Jakary A, Lupo JM, Mackin S, Yin A, Murray D, Yang T, Mukherjee P, Larson P, Xu D, Eisendrath S, Luks T, Li Y
• Alzheimer's Disease-Related Dementias Summit 2022: National Research Priorities for the Investigation of Post-Traumatic Brain Injury Alzheimer's Disease and Related Dementias.
  Journal of neurotrauma 2023 Dams-O'Connor K, Awwad HO, Hoffman S, Pugh MJ, Johnson VE, Keene CD, McGavern L, Mukherjee P, Opanashuk L, Umoh N, Sopko G, Zetterberg H
• Response to Hutchinson M. "The Concept of Mild Traumatic Brain Injury: Response to Palacios et al." (doi: 10.1089/neu.2023.0011).
  Journal of neurotrauma 2023 Mukherjee P, Palacios EM, Manley GT
• Neuroinflammatory Biomarkers for Traumatic Brain Injury Diagnosis and Prognosis: A TRACK-TBI Pilot Study.
  Neurotrauma reports 2023 Yue JK, Kobeissy FH, Jain S, Sun X, Phelps RRL, Korley FK, Gardner RC, Ferguson AR, Huie JR, Schneider ALC, Yang Z, Xu H, Lynch CE, Deng H, Rabinowitz M, Vassar MJ, Taylor SR, Mukherjee P, Yuh EL, …
• Neuroworsening in the Emergency Department Is a Predictor of Traumatic Brain Injury Intervention and Outcome: A TRACK-TBI Pilot Study.
  Journal of clinical medicine 2023 Yue JK, Krishnan N, Kanter JH, Deng H, Okonkwo DO, Puccio AM, Madhok DY, Belton PJ, Lindquist BE, Satris GG, Lee YM, Umbach G, Duhaime AC, Mukherjee P, Yuh EL, Valadka AB, DiGiorgio AM, Tarapore PE, …
• Polygenic risk for mental disorders as predictors of posttraumatic stress disorder after mild traumatic brain injury.
  Translational psychiatry 2023 Stein MB, Jain S, Parodi L, Choi KW, Maihofer AX, Nelson LD, Mukherjee P, Sun X, He F, Okonkwo DO, Giacino JT, Korley FK, Vassar MJ, Robertson CS, McCrea MA, Temkin N, Markowitz AJ, Diaz-Arrastia R, …
• Correction to: Association of day-of-injury plasma glial fibrillary acidic protein concentration and six-month posttraumatic stress disorder in patients with mild traumatic brain injury.
  Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology 2022 Kulbe JR, Jain S, Nelson LD, Korley FK, Mukherjee P, Sun X, Okonkwo DO, Giacino JT, Vassar MJ, Robertson CS, McCrea MA, Wang KKW, Temkin N, Mac Donald CL, Taylor SR, Ferguson AR, Markowitz AJ, Diaz-…
• Effects of age and time since injury on traumatic brain injury blood biomarkers: a TRACK-TBI study.
  Brain communications 2022 Gardner RC, Puccio AM, Korley FK, Wang KKW, Diaz-Arrastia R, Okonkwo DO, Puffer RC, Yuh EL, Yue JK, Sun X, Taylor SR, Mukherjee P, Jain S, Manley GT, TRACK-TBI Investigators
• Brief Report: Characterization of Sensory Over-Responsivity in a Broad Neurodevelopmental Concern Cohort Using the Sensory Processing Three Dimensions (SP3D) Assessment.
  Journal of autism and developmental disorders 2022 Lazerwitz MC, Rowe MA, Trimarchi KJ, Garcia RD, Chu R, Steele MC, Parekh S, Wren-Jarvis J, Bourla I, Mark I, Marco EJ, Mukherjee P
• Traumatic brain injury: progress and challenges in prevention, clinical care, and research.
  The Lancet. Neurology 2022 Maas AIR, Menon DK, Manley GT, Abrams M, Åkerlund C, Andelic N, Aries M, Bashford T, Bell MJ, Bodien YG, Brett BL, Büki A, Chesnut RM, Citerio G, Clark D, Clasby B, Cooper DJ, Czeiter E, Czosnyka M, …
• Age-dependent white matter microstructural disintegrity in autism spectrum disorder.
  Frontiers in neuroscience 2022 Weber CF, Lake EMR, Haider SP, Mozayan A, Mukherjee P, Scheinost D, Bamford NS, Ment L, Constable T, Payabvash S
• Prognostic value of day-of-injury plasma GFAP and UCH-L1 concentrations for predicting functional recovery after traumatic brain injury in patients from the US TRACK-TBI cohort: an observational cohort study.
  The Lancet. Neurology 2022 Korley FK, Jain S, Sun X, Puccio AM, Yue JK, Gardner RC, Wang KKW, Okonkwo DO, Yuh EL, Mukherjee P, Nelson LD, Taylor SR, Markowitz AJ, Diaz-Arrastia R, Manley GT, TRACK-TBI Study Investigators
• Association of day-of-injury plasma glial fibrillary acidic protein concentration and six-month posttraumatic stress disorder in patients with mild traumatic brain injury.
  Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology 2022 Kulbe JR, Jain S, Nelson LD, Korley FK, Mukherjee P, Sun X, Okonkwo DO, Giacino JT, Vassar MJ, Robertson CS, McCrea MA, Wang KKW, Temkin N, Mac Donald CL, Taylor SR, Ferguson AR, Markowitz AJ, Diaz-…
• The Case for Optimized Edge-Centric Tractography at Scale.
  Frontiers in neuroinformatics 2022 Moon JY, Mukherjee P, Madduri RK, Markowitz AJ, Cai LT, Palacios EM, Manley GT, Bremer PT
• Acute blood biomarkers predict chronic insomnia trajectories following traumatic brain injury: A TRACK-TBI study (S1.005).
  Neurology 2022 Jackie Gottshall, Bryson Hewins, Andrew Krystal, Jennifer Albrecht, Vincent Capaldi, Sonia Jain, Pratik Mukherjee, Ashlee McKeon, Michael Smith, Joseph Giacino, Raquel Gardner, Lindsay Nelson, Scott …
• Trajectories of Insomnia Following Traumatic Brain Injury (P1-1.Virtual).
  Neurology 2022 John Werner, Bryson Hewins, Andrew Krystal, Jennifer Albrecht, Vincent Capaldi, Pratik Mukherjee, Sonia Jain, Ashlee McKeon, Michael Smith, Joseph Giacino, Raquel Gardner, Lindsay Nelson, Scott …
• 182 Predictors of Six-Month Inability to Return to Work in Previously Employed Subjects After Mild Traumatic Brain Injury: A TRACK-TBI Pilot Study.
  Neurosurgery 2022 John K. Yue, Ryan R. L. Phelps, Debra P. Hemmerle, Pavan S. Upadhyayula, Ethan A. Winkler, Hansen Deng, Diana Chang, Mary Vassar, Sabrina Taylor, David Schnyer, Hester F. Lingsma, Ava Puccio, Esther …
• Personalized Connectome-Based Modeling in Patients with Semi-Acute Phase TBI: Relationship to Acute Neuroimaging and 6 Month Follow-Up.
  eNeuro 2022 Good T, Schirner M, Shen K, Ritter P, Mukherjee P, Levine B, McIntosh AR
• Trajectories of Insomnia in Adults After Traumatic Brain Injury.
  JAMA network open 2022 Wickwire EM, Albrecht JS, Capaldi VF, Jain SO, Gardner RC, Werner JK, Mukherjee P, McKeon AB, Smith MT, Giacino JT, Nelson LD, Williams SG, Collen J, Sun X, Schnyer DM, Markowitz AJ, Manley GT, …
• Association of Posttraumatic Epilepsy With 1-Year Outcomes After Traumatic Brain Injury.
  JAMA network open 2021 Burke J, Gugger J, Ding K, Kim JA, Foreman B, Yue JK, Puccio AM, Yuh EL, Sun X, Rabinowitz M, Vassar MJ, Taylor SR, Winkler EA, Deng H, McCrea M, Stein MB, Robertson CS, Levin HS, Dikmen S, Temkin NR,…
• Correction to: Prognostic Value of Hemorrhagic Brainstem Injury on Early Computed Tomography: A TRACK-TBI Study.
  Neurocritical care 2021 Williams JR, Nieblas-Bedolla E, Feroze A, Young C, Temkin NR, Giacino JT, Okonkwo DO, Manley GT, Barber J, Durfy S, Markowitz AJ, Yuh EL, Mukherjee P, Mac Donald CL, Transforming Research and Clinical…
• Interrater Reliability of National Institutes of Health Traumatic Brain Injury Imaging Common Data Elements for Brain Magnetic Resonance Imaging in Mild Traumatic Brain Injury.
  Journal of neurotrauma 2021 Rincon SP, Mukherjee P, Levin HS, Temkin NR, Mac Donald CL, Krainak DM, Sun X, Jain S, Taylor SR, Markowitz AJ, Kumar A, Manley GT, Yuh EL, TRACK-TBI Investigators
• Diffusion MRI Automated Region of Interest Analysis in Standard Atlas Space versus the Individual’s Native Space.
  2021 Lanya T. Cai, Maria Baida, Jamie Wren-Jarvis, Ioanna Bourla, Pratik Mukherjee
• Pathological Computed Tomography Features Associated With Adverse Outcomes After Mild Traumatic Brain Injury: A TRACK-TBI Study With External Validation in CENTER-TBI.
  JAMA neurology 2021 Yuh EL, Jain S, Sun X, Pisica D, Harris MH, Taylor SR, Markowitz AJ, Mukherjee P, Verheyden J, Giacino JT, Levin HS, McCrea M, Stein MB, Temkin NR, Diaz-Arrastia R, Robertson CS, Lingsma HF, Okonkwo …
• Functional Outcomes Over the First Year After Moderate to Severe Traumatic Brain Injury in the Prospective, Longitudinal TRACK-TBI Study.
  JAMA neurology 2021 McCrea MA, Giacino JT, Barber J, Temkin NR, Nelson LD, Levin HS, Dikmen S, Stein M, Bodien YG, Boase K, Taylor SR, Vassar M, Mukherjee P, Robertson C, Diaz-Arrastia R, Okonkwo DO, Markowitz AJ, Manley…
• Prognostic Value of Hemorrhagic Brainstem Injury on Early Computed Tomography: A TRACK-TBI Study.
  Neurocritical care 2021 Williams JR, Nieblas-Bedolla E, Feroze A, Young C, Temkin NR, Giacino JT, Okonkwo DO, Manley GT, Barber J, Durfy S, Markowitz AJ, Yuh EL, Mukherjee P, Mac Donald CL, and The Transforming Research and …
• Cognitive impairment after focal brain lesions is better predicted by damage to structural than functional network hubs.
  Proceedings of the National Academy of Sciences of the United States of America 2021 Reber J, Hwang K, Bowren M, Bruss J, Mukherjee P, Tranel D, Boes AD
• Predictors of six-month inability to return to work in previously employed subjects after mild traumatic brain injury: A TRACK-TBI pilot study.
  Journal of concussion 2021 Yue JK, Phelps RR, Hemmerle DD, Upadhyayula PS, Winkler EA, Deng H, Chang D, Vassar MJ, Taylor SR, Schnyer DM, Lingsma HF, Puccio AM, Yuh EL, Mukherjee P, Huang MC, Ngwenya LB, Valadka AB, Markowitz …
• Association of Sex and Age With Mild Traumatic Brain Injury-Related Symptoms: A TRACK-TBI Study.
  JAMA network open 2021 Levin HS, Temkin NR, Barber J, Nelson LD, Robertson C, Brennan J, Stein MB, Yue JK, Giacino JT, McCrea MA, Diaz-Arrastia R, Mukherjee P, Okonkwo DO, Boase K, Markowitz AJ, Bodien Y, Taylor S, Vassar …
• A quantitative approach for measuring laterality in clinical fMRI for preoperative language mapping.
  Neuroradiology 2021 Olaru M, Nillo RM, Mukherjee P, Sugrue LP
• Latent Profile Analysis of Neuropsychiatric Symptoms and Cognitive Function of Adults 2 Weeks After Traumatic Brain Injury: Findings From the TRACK-TBI Study.
  JAMA network open 2021 Brett BL, Kramer MD, Whyte J, McCrea MA, Stein MB, Giacino JT, Sherer M, Markowitz AJ, Manley GT, Nelson LD, TRACK-TBI Investigators, Adeoye O, Badjatia N, Boase K, Barber J, Bodien Y, Bullock MR, …
• Tractography-Pathology Correlations in Traumatic Brain Injury: A TRACK-TBI Study.
  Journal of neurotrauma 2021 Nolan AL, Petersen C, Iacono D, Mac Donald CL, Mukherjee P, van der Kouwe A, Jain S, Stevens A, Diamond BR, Wang R, Markowitz AJ, Fischl B, Perl DP, Manley GT, Keene CD, Diaz-Arrastia R, Edlow BL, …
• High-Sensitivity C-Reactive Protein is a Prognostic Biomarker of Six-Month Disability after Traumatic Brain Injury: Results from the TRACK-TBI Study.
  Journal of neurotrauma 2020 Xu LB, Yue JK, Korley F, Puccio AM, Yuh EL, Sun X, Rabinowitz M, Vassar MJ, Taylor SR, Winkler EA, Puffer RC, Deng H, McCrea M, Stein MB, Robertson CS, Levin HS, Dikmen S, Temkin NR, Giacino JT, …
• Satisfaction with Life after Mild Traumatic Brain Injury: A TRACK-TBI Study.
  Journal of neurotrauma 2020 Agtarap SD, Campbell-Sills L, Jain S, Sun X, Dikmen S, Levin H, McCrea MA, Mukherjee P, Nelson LD, Temkin N, Yuh EL, Giacino JT, Manley GT, Stein MB, TRACK-TBI Investigators
• Diffuse Axonal Injury and Cerebral Contusions on MRI Are Associated with Decreased Functional Outcome in CT-negative TBI.
  Neurosurgery 2020 John K Yue, Esther Yuh, Murray Stein, Ethan Winkler, Hansen Deng, Cecilia L Dalle Ore, Mary Vassar, Sabrina Taylor, David Schnyer, Hester F Lingsma, Ava Puccio, Pratik Mukherjee, Alex B Valadka, David…
• Polytrauma is Associated with Worse 3- and 6-month Disability After Traumatic Brain Injury.
  Neurosurgery 2020 John K Yue, Gabriela Satris, Cecilia L Dalle Ore, J. Russell Huie, Hansen Deng, Ethan A Winkler, Young M Lee, Mary Vassar, Sabrina Taylor, David M Schnyer, Hester F Lingsma, Ava Puccio, Esther Yuh, …
• Data-science ready, multisite, human diffusion MRI white-matter-tract statistics.
  Scientific data 2020 Lerma-Usabiaga G, Mukherjee P, Perry ML, Wandell BA
• Concussion Disrupts Normal Brain White Matter Microstructural Symmetry.
  Frontiers in neurology 2020 Maruta J, Mallott JM, Sulioti G, Ghajar J, Palacios EM, Mukherjee P
• Point-of-Care Platform Blood Biomarker Testing of Glial Fibrillary Acidic Protein versus S100 Calcium-Binding Protein B for Prediction of Traumatic Brain Injuries: A Transforming Research and Clinical Knowledge in Traumatic Brain Injury Study.
  Journal of neurotrauma 2020 Okonkwo DO, Puffer RC, Puccio AM, Yuh EL, Yue JK, Diaz-Arrastia R, Korley FK, Wang KKW, Sun X, Taylor SR, Mukherjee P, Markowitz AJ, Jain S, Manley GT, Transforming Research and Clinical Knowledge in …
• Atypical Presentation of Severe Posterior Reversible Encephalopathy Syndrome: An Important Diagnosis in Neurocritical Care.
  Journal of neurosciences in rural practice 2020 Deng H, Yue JK, Mukherjee P
• Polytrauma Is Associated with Increased Three- and Six-Month Disability after Traumatic Brain Injury: A TRACK-TBI Pilot Study.
  Neurotrauma reports 2020 Yue JK, Satris GG, Dalle Ore CL, Huie JR, Deng H, Winkler EA, Lee YM, Vassar MJ, Taylor SR, Schnyer DM, Lingsma HF, Puccio AM, Yuh EL, Mukherjee P, Valadka AB, Ferguson AR, Markowitz AJ, Okonkwo DO, …
• Invariance of the Bifactor Structure of Mild Traumatic Brain Injury (mTBI) Symptoms on the Rivermead Postconcussion Symptoms Questionnaire Across Time, Demographic Characteristics, and Clinical Groups: A TRACK-TBI Study.
  Assessment 2020 Agtarap S, Kramer MD, Campbell-Sills L, Yuh E, Mukherjee P, Manley GT, McCrea MA, Dikmen S, Giacino JT, Stein MB, Nelson LD, TRACK-TBI Investigators <xref ref-type="aff" rid="aff7-1073191120913941"…
• Spectral graph theory of brain oscillations.
  Human brain mapping 2020 Raj A, Cai C, Xie X, Palacios E, Owen J, Mukherjee P, Nagarajan S
• ENIGMA and global neuroscience: A decade of large-scale studies of the brain in health and disease across more than 40 countries.
  Translational psychiatry 2020 Thompson PM, Jahanshad N, Ching CRK, Salminen LE, Thomopoulos SI, Bright J, Baune BT, Bertolín S, Bralten J, Bruin WB, Bülow R, Chen J, Chye Y, Dannlowski U, de Kovel CGF, Donohoe G, Eyler LT, Faraone…
• Substance use on admission toxicology screen is associated with peri-injury factors and six-month outcome after traumatic brain injury: A TRACK-TBI Pilot study.
  Journal of clinical neuroscience : official journal of the Neurosurgical Society of Australasia 2020 Yue JK, Phelps RRL, Winkler EA, Deng H, Upadhyayula PS, Vassar MJ, Madhok DY, Schnyer DM, Puccio AM, Lingsma HF, Yuh EL, Mukherjee P, Valadka AB, Okonkwo DO, Manley GT, TRACK-TBI Investigators
• Abnormal Auditory Mismatch Fields in Children and Adolescents With 16p11.2 Deletion and 16p11.2 Duplication.
  Biological psychiatry. Cognitive neuroscience and neuroimaging 2019 Matsuzaki J, Berman JI, Blaskey L, Kuschner ES, Gaetz L, Mukherjee P, Buckner RL, Nagarajan SS, Chung WK, Sherr EH, Roberts TPL, Simons VIP Consortium
• Resting State Functional Connectivity is Directly Related to Clinical Presentation of Mild Traumatic Brain Injury.
  Neurology 2019 Teena Shetty, Joseph Nguyen, Esther Kim, George Skulikidis, Matthew Garvey, Caitlin Miller, Taylor Sogsil, Apostolos Tsiouris, Sumit Niogi, Aashka Dalal, Kristin Halvorsen, Tianhao Zhang, Joseph …
• Brain Derived Neurotrophic Factor (BDNF) Val66Met Single Nucleotide Polymorphism (rs6265) is Associated With Decreased Functional Outcome After Traumatic Brain Injury: A Multicenter Cohort Study.
  Neurosurgery 2019 John K Yue, Ethan A Winkler, Hansen Deng, Ryan R L Phelps, Ankush Chandra, Mary J Vassar, David M Schnyer, Ava Puccio, Hester F Lingsma, Esther Yuh, Pratik Mukherjee, Alex B Valadka, David O Okonkwo, …
• Recovery After Mild Traumatic Brain Injury in Patients Presenting to US Level I Trauma Centers: A Transforming Research and Clinical Knowledge in Traumatic Brain Injury (TRACK-TBI) Study.
  JAMA neurology 2019 Nelson LD, Temkin NR, Dikmen S, Barber J, Giacino JT, Yuh E, Levin HS, McCrea MA, Stein MB, Mukherjee P, Okonkwo DO, Robertson CS, Diaz-Arrastia R, Manley GT, and the TRACK-TBI Investigators, Adeoye O…
• An Open-Source Tool for Anisotropic Radiation Therapy Planning in Neuro-oncology Using DW-MRI Tractography.
  Frontiers in oncology 2019 Jordan K, Morin O, Wahl M, Amirbekian B, Chapman C, Owen J, Mukherjee P, Braunstein S, Henry R
• The LONI QC System: A Semi-Automated, Web-Based and Freely-Available Environment for the Comprehensive Quality Control of Neuroimaging Data.
  Frontiers in neuroinformatics 2019 Kim H, Irimia A, Hobel SM, Pogosyan M, Tang H, Petrosyan P, Blanco REC, Duffy BA, Zhao L, Crawford KL, Liew SL, Clark K, Law M, Mukherjee P, Manley GT, Van Horn JD, Toga AW
• Association between plasma GFAP concentrations and MRI abnormalities in patients with CT-negative traumatic brain injury in the TRACK-TBI cohort: a prospective multicentre study.
  The Lancet. Neurology 2019 Yue JK, Yuh EL, Korley FK, Winkler EA, Sun X, Puffer RC, Deng H, Choy W, Chandra A, Taylor SR, Ferguson AR, Huie JR, Rabinowitz M, Puccio AM, Mukherjee P, Vassar MJ, Wang KKW, Diaz-Arrastia R, Okonkwo…
• Sensorimotor Cortical Oscillations during Movement Preparation in 16p11.2 Deletion Carriers.
  The Journal of neuroscience : the official journal of the Society for Neuroscience 2019 Hinkley LBN, Dale CL, Luks TL, Findlay AM, Bukshpun P, Pojman N, Thieu T, Chung WK, Berman J, Roberts TPL, Mukherjee P, Sherr EH, Nagarajan SS
• Age and sex-mediated differences in six-month outcomes after mild traumatic brain injury in young adults: a TRACK-TBI study.
  Neurological research 2019 Yue JK, Levin HS, Suen CG, Morrissey MR, Runyon SJ, Winkler EA, Puffer RC, Deng H, Robinson CK, Rick JW, Phelps RRL, Sharma S, Taylor SR, Vassar MJ, Cnossen MC, Lingsma HF, Gardner RC, Temkin NR, …
• Pre-injury Comorbidities Are Associated With Functional Impairment and Post-concussive Symptoms at 3- and 6-Months After Mild Traumatic Brain Injury: A TRACK-TBI Study.
  Frontiers in neurology 2019 Yue JK, Cnossen MC, Winkler EA, Deng H, Phelps RRL, Coss NA, Sharma S, Robinson CK, Suen CG, Vassar MJ, Schnyer DM, Puccio AM, Gardner RC, Yuh EL, Mukherjee P, Valadka AB, Okonkwo DO, Lingsma HF, …
• Risk of Posttraumatic Stress Disorder and Major Depression in Civilian Patients After Mild Traumatic Brain Injury: A TRACK-TBI Study.
  JAMA psychiatry 2019 Stein MB, Jain S, Giacino JT, Levin H, Dikmen S, Nelson LD, Vassar MJ, Okonkwo DO, Diaz-Arrastia R, Robertson CS, Mukherjee P, McCrea M, Mac Donald CL, Yue JK, Yuh E, Sun X, Campbell-Sills L, Temkin N…
• How to See Into the Brain Without Surgery!.
  Frontiers for Young Minds 2019 Christine L. Mac Donald, Pratik Mukherjee, Esther Yuh
• Sensory over-responsivity: parent report, direct assessment measures, and neural architecture.
  Molecular autism 2019 Tavassoli T, Brandes-Aitken A, Chu R, Porter L, Schoen S, Miller LJ, Gerdes MR, Owen J, Mukherjee P, Marco EJ
• Recommendations towards standards for quantitative MRI (qMRI) and outstanding needs.
  Journal of magnetic resonance imaging : JMRI 2019 Keenan KE, Biller JR, Delfino JG, Boss MA, Does MD, Evelhoch JL, Griswold MA, Gunter JL, Hinks RS, Hoffman SW, Kim G, Lattanzi R, Li X, Marinelli L, Metzger GJ, Mukherjee P, Nordstrom RJ, Peskin AP, …
• White Matter Microstructure Associations of Cognitive and Visuomotor Control in Children: A Sensory Processing Perspective.
  Frontiers in integrative neuroscience 2019 Brandes-Aitken A, Anguera JA, Chang YS, Demopoulos C, Owen JP, Gazzaley A, Mukherjee P, Marco EJ
• Recovery time, risk factors, and volumetric analysis in acute mTBI.
  Neurology 2018 Teena Shetty, Joseph Nguyen, Taylor Cogsil, Apostolos John Tsiouris, Sumit Niogi, Aashka Dalal, Kristin Halvorsen, Tianhao Zhang, Joseph C. Masdeu, Pratik Mukherjee, Luca Marinelli
• Functional and Structural Brain Plasticity in Adult Onset Single-Sided Deafness.
  Frontiers in human neuroscience 2018 Shang Y, Hinkley LB, Cai C, Subramaniam K, Chang YS, Owen JP, Garrett C, Mizuiri D, Mukherjee P, Nagarajan SS, Cheung SW
• Clinical Findings in a Multicenter MRI Study of Mild TBI.
  Frontiers in neurology 2018 Shetty T, Nguyen JT, Cogsil T, Tsiouris AJ, Niogi SN, Kim EU, Dalal A, Halvorsen K, Cummings K, Zhang T, Masdeu JC, Mukherjee P, Marinelli L
• Longitudinal Resting State Functional Connectivity Predicts Clinical Outcome in Mild Traumatic Brain Injury.
  Journal of neurotrauma 2018 Madhavan R, Joel SE, Mullick R, Cogsil T, Niogi SN, Tsiouris AJ, Mukherjee P, Masdeu JC, Marinelli L, Shetty T
• Temporal lobe contusions on computed tomography are associated with impaired 6-month functional recovery after mild traumatic brain injury: a TRACK-TBI study.
  Neurological research 2018 Yue JK, Winkler EA, Puffer RC, Deng H, Phelps RRL, Wagle S, Morrissey MR, Rivera EJ, Runyon SJ, Vassar MJ, Taylor SR, Cnossen MC, Lingsma HF, Yuh EL, Mukherjee P, Schnyer DM, Puccio AM, Valadka AB, …
• Performance Evaluation of a Multiplex Assay for Simultaneous Detection of Four Clinically Relevant Traumatic Brain Injury Biomarkers.
  Journal of neurotrauma 2018 Korley FK, Yue JK, Wilson DH, Hrusovsky K, Diaz-Arrastia R, Ferguson AR, Yuh EL, Mukherjee P, Wang KKW, Valadka AB, Puccio AM, Okonkwo DO, Manley GT
• Concordance of common data elements for assessment of subjective cognitive complaints after mild-traumatic brain injury: a TRACK-TBI Pilot Study.
  Brain injury 2018 Ngwenya LB, Gardner RC, Yue JK, Burke JF, Ferguson AR, Huang MC, Winkler EA, Pirracchio R, Satris GG, Yuh EL, Mukherjee P, Valadka AB, Okonkwo DO, Manley GT
• Assessment of Follow-up Care After Emergency Department Presentation for Mild Traumatic Brain Injury and Concussion: Results From the TRACK-TBI Study.
  JAMA network open 2018 Seabury SA, Gaudette É, Goldman DP, Markowitz AJ, Brooks J, McCrea MA, Okonkwo DO, Manley GT, TRACK-TBI Investigators, Adeoye O, Badjatia N, Boase K, Bodien Y, Bullock MR, Chesnut R, Corrigan JD, …
• Abnormal age-related cortical folding and neurite morphology in children with developmental dyslexia.
  NeuroImage. Clinical 2018 Caverzasi E, Mandelli ML, Hoeft F, Watson C, Meyer M, Allen IE, Papinutto N, Wang C, Gandini Wheeler-Kingshott CAM, Marco EJ, Mukherjee P, Miller ZA, Miller BL, Hendren R, Shapiro KA, Gorno-Tempini ML
• Cost-Sensitive Active Learning for Intracranial Hemorrhage Detection.
  Medical Image Computing and Computer Assisted Intervention – MICCAI 2018 2018 Weicheng Kuo, Christian Häne, Esther Yuh, Pratik Mukherjee, Jitendra Malik
• Preinjury employment status as a risk factor for symptomatology and disability in mild traumatic brain injury: A TRACK-TBI analysis.
  NeuroRehabilitation 2018 Yue JK, Rick JW, Morrissey MR, Taylor SR, Deng H, Suen CG, Vassar MJ, Cnossen MC, Lingsma HF, Yuh EL, Mukherjee P, Gardner RC, Valadka AB, Okonkwo DO, Cage TA, Manley GT, TRACK-TBI Investigators
• 3.27 Assessing White Matter Correlates of Cognitive and Visuomotor Control Deficits in Children With Sensory Processing Disorders.
  Journal of the American Academy of Child & Adolescent Psychiatry 2017 Annie Brandes-Aitken, Joaquin A. Anguera, Yi-Shin Chang, Julia P. Owen, Pratik Mukherjee, Elysa J. Marco
• Comparing Plasma Phospho Tau, Total Tau, and Phospho Tau-Total Tau Ratio as Acute and Chronic Traumatic Brain Injury Biomarkers.
  JAMA neurology 2017 Rubenstein R, Chang B, Yue JK, Chiu A, Winkler EA, Puccio AM, Diaz-Arrastia R, Yuh EL, Mukherjee P, Valadka AB, Gordon WA, Okonkwo DO, Davies P, Agarwal S, Lin F, Sarkis G, Yadikar H, Yang Z, Manley …
• Apolipoprotein E epsilon 4 (APOE-ε4) genotype is associated with decreased 6-month verbal memory performance after mild traumatic brain injury.
  Brain and behavior 2017 Yue JK, Robinson CK, Burke JF, Winkler EA, Deng H, Cnossen MC, Lingsma HF, Ferguson AR, McAllister TW, Rosand J, Burchard EG, Sorani MD, Sharma S, Nielson JL, Satris GG, Talbott JF, Tarapore PE, …
• Brain MR Imaging Findings and Associated Outcomes in Carriers of the Reciprocal Copy Number Variation at 16p11.2.
  Radiology 2017 Owen JP, Bukshpun P, Pojman N, Thieu T, Chen Q, Lee J, D'Angelo D, Glenn OA, Hunter JV, Berman JI, Roberts TP, Buckner R, Nagarajan SS, Mukherjee P, Sherr EH
• Emergency department blood alcohol level associates with injury factors and six-month outcome after uncomplicated mild traumatic brain injury.
  Journal of clinical neuroscience : official journal of the Neurosurgical Society of Australasia 2017 Yue JK, Ngwenya LB, Upadhyayula PS, Deng H, Winkler EA, Burke JF, Lee YM, Robinson CK, Ferguson AR, Lingsma HF, Cnossen MC, Pirracchio R, Korley FK, Vassar MJ, Yuh EL, Mukherjee P, Gordon WA, Valadka …
• White matter microstructure predicts cognitive training-induced improvements in attention and executive functioning in schizophrenia.
  Schizophrenia research 2017 Subramaniam K, Gill J, Fisher M, Mukherjee P, Nagarajan S, Vinogradov S
• Uncovering precision phenotype-biomarker associations in traumatic brain injury using topological data analysis.
  PloS one 2017 Nielson JL, Cooper SR, Yue JK, Sorani MD, Inoue T, Yuh EL, Mukherjee P, Petrossian TC, Paquette J, Lum PY, Carlsson GE, Vassar MJ, Lingsma HF, Gordon WA, Valadka AB, Okonkwo DO, Manley GT, Ferguson AR…
• Temporal profile of care following mild traumatic brain injury: predictors of hospital admission, follow-up referral and six-month outcome.
  Brain injury 2017 Yue JK, Winkler EA, Sharma S, Vassar MJ, Ratcliff JJ, Korley FK, Seabury SA, Ferguson AR, Lingsma HF, Deng H, Meeuws S, Adeoye OM, Rick JW, Robinson CK, Duarte SM, Yuh EL, Mukherjee P, Dikmen SS, …
• DRD2 C957T polymorphism is associated with improved 6-month verbal learning following traumatic brain injury.
  Neurogenetics 2016 Yue JK, Winkler EA, Rick JW, Burke JF, McAllister TW, Oh SS, Burchard EG, Hu D, Rosand J, Temkin NR, Korley FK, Sorani MD, Ferguson AR, Lingsma HF, Sharma S, Robinson CK, Yuh EL, Tarapore PE, Wang KK,…
• COMT Val158Met polymorphism is associated with post-traumatic stress disorder and functional outcome following mild traumatic brain injury.
  Journal of clinical neuroscience : official journal of the Neurosurgical Society of Australasia 2016 Winkler EA, Yue JK, Ferguson AR, Temkin NR, Stein MB, Barber J, Yuh EL, Sharma S, Satris GG, McAllister TW, Rosand J, Sorani MD, Lingsma HF, Tarapore PE, Burchard EG, Hu D, Eng C, Wang KK, Mukherjee P…
• Association Between Genetic Traits for Immune-Mediated Diseases and Alzheimer Disease.
  JAMA neurology 2016 Yokoyama JS, Wang Y, Schork AJ, Thompson WK, Karch CM, Cruchaga C, McEvoy LK, Witoelar A, Chen CH, Holland D, Brewer JB, Franke A, Dillon WP, Wilson DM, Mukherjee P, Hess CP, Miller Z, Bonham LW, Shen…
• The Contribution of the Corpus Callosum to Language Lateralization.
  The Journal of neuroscience : the official journal of the Society for Neuroscience 2016 Hinkley LB, Marco EJ, Brown EG, Bukshpun P, Gold J, Hill S, Findlay AM, Jeremy RJ, Wakahiro ML, Barkovich AJ, Mukherjee P, Sherr EH, Nagarajan SS
• Edge correlations in spatial networks.
  Journal of Complex Networks 2016 Eric J. Friedman, Adam S. Landsberg, Julia Owen, Wenson Hsieh, Leo Kam, Pratik Mukherjee
• Evaluating metabolites in patients with major depressive disorder who received mindfulness-based cognitive therapy and healthy controls using short echo MRSI at 7 Tesla.
  Magma (New York, N.Y.) 2016 Li Y, Jakary A, Gillung E, Eisendrath S, Nelson SJ, Mukherjee P, Luks T
• Diffusion-Weighted Magnetic Resonance Imaging Characterization of White Matter Injury Produced by Axon-Sparing Demyelination and Severe Contusion Spinal Cord Injury in Rats.
  Journal of neurotrauma 2016 Talbott JF, Nout-Lomas YS, Wendland MF, Mukherjee P, Huie JR, Hess CP, Mabray MC, Bresnahan JC, Beattie MS
• Plasma Anti-Glial Fibrillary Acidic Protein Autoantibody Levels during the Acute and Chronic Phases of Traumatic Brain Injury: A Transforming Research and Clinical Knowledge in Traumatic Brain Injury Pilot Study.
  Journal of neurotrauma 2016 Wang KK, Yang Z, Yue JK, Zhang Z, Winkler EA, Puccio AM, Diaz-Arrastia R, Lingsma HF, Yuh EL, Mukherjee P, Valadka AB, Gordon WA, Okonkwo DO, Manley GT, Cooper SR, Dams-O'Connor K, Hricik AJ, Inoue T,…
• Defining the Effect of the 16p11.2 Duplication on Cognition, Behavior, and Medical Comorbidities.
  JAMA psychiatry 2016 D'Angelo D, Lebon S, Chen Q, Martin-Brevet S, Snyder LG, Hippolyte L, Hanson E, Maillard AM, Faucett WA, Macé A, Pain A, Bernier R, Chawner SJ, David A, Andrieux J, Aylward E, Baujat G, Caldeira I, …
• COMT Val 158 Met polymorphism is associated with nonverbal cognition following mild traumatic brain injury.
  Neurogenetics 2015 Winkler EA, Yue JK, McAllister TW, Temkin NR, Oh SS, Burchard EG, Hu D, Ferguson AR, Lingsma HF, Burke JF, Sorani MD, Rosand J, Yuh EL, Barber J, Tarapore PE, Gardner RC, Sharma S, Satris GG, Eng C, …
• Circulating Brain-Derived Neurotrophic Factor Has Diagnostic and Prognostic Value in Traumatic Brain Injury.
  Journal of neurotrauma 2015 Korley FK, Diaz-Arrastia R, Wu AH, Yue JK, Manley GT, Sair HI, Van Eyk J, Everett AD, TRACK-TBI investigators, Okonkwo DO, Valadka AB, Gordon WA, Maas AI, Mukherjee P, Yuh EL, Lingsma HF, Puccio AM, …
• 178 COMT Val158Met is Associated With Domain-Specific Cognitive Impairment Following Mild Traumatic Brain Injury.
  Neurosurgery 2015 John K. Yue, Ethan A. Winkler, Thomas W. McAllister, Nancy Temkin, Adam Ferguson, Hester F. Lingsma, Esther Yuh, Phiroz E. Tarapore, Sourabh Sharma, Ava Puccio, Kevin Wang, Pratik Mukherjee, Alex B. …
• Abnormal auditory and language pathways in children with 16p11.2 deletion.
  NeuroImage. Clinical 2015 Berman JI, Chudnovskaya D, Blaskey L, Kuschner E, Mukherjee P, Buckner R, Nagarajan S, Chung WK, Spiro JE, Sherr EH, Roberts TP
• Auditory Evoked M100 Response Latency is Delayed in Children with 16p11.2 Deletion but not 16p11.2 Duplication.
  Cerebral cortex (New York, N.Y. : 1991) 2015 Jenkins J, Chow V, Blaskey L, Kuschner E, Qasmieh S, Gaetz L, Edgar JC, Mukherjee P, Buckner R, Nagarajan SS, Chung WK, Spiro JE, Sherr EH, Berman JI, Roberts TP
• Measurement of the glial fibrillary acidic protein and its breakdown products GFAP-BDP biomarker for the detection of traumatic brain injury compared to computed tomography and magnetic resonance imaging.
  Journal of neurotrauma 2015 McMahon PJ, Panczykowski DM, Yue JK, Puccio AM, Inoue T, Sorani MD, Lingsma HF, Maas AI, Valadka AB, Yuh EL, Mukherjee P, Manley GT, Okonkwo DO, TRACK-TBI Investigators
• Genetic data sharing and privacy.
  Neuroinformatics 2015 Sorani MD, Yue JK, Sharma S, Manley GT, Ferguson AR, TRACK TBI Investigators
• Outcome prediction after mild and complicated mild traumatic brain injury: external validation of existing models and identification of new predictors using the TRACK-TBI pilot study.
  Journal of neurotrauma 2014 Lingsma HF, Yue JK, Maas AI, Steyerberg EW, Manley GT, TRACK-TBI Investigators
• Opposing brain differences in 16p11.2 deletion and duplication carriers.
  The Journal of neuroscience : the official journal of the Society for Neuroscience 2014 Qureshi AY, Mueller S, Snyder AZ, Mukherjee P, Berman JI, Roberts TP, Nagarajan SS, Spiro JE, Chung WK, Sherr EH, Buckner RL, Simons VIP Consortium
• Stochastic geometric network models for groups of functional and structural connectomes.
  NeuroImage 2014 Friedman EJ, Landsberg AS, Owen JP, Li YO, Mukherjee P
• TU-C-12A-08: Thermally-Stabilized Isotropic Diffusion Phantom for Multisite Assessment of Apparent Diffusion Coefficient Reproducibilty.
  Medical Physics 2014 M Boss, T Chenevert, J Waterton, D Morris, H Ragheb, A Jackson, N deSouza, D Collins, B van Beers, P Garteiser, S Doblas, T Persigehl, D Hedderich, A Martin, P Mukherjee, K Keenan, S Russek, E Jackson…
• Symptomatology and functional outcome in mild traumatic brain injury: results from the prospective TRACK-TBI study.
  Journal of neurotrauma 2013 McMahon P, Hricik A, Yue JK, Puccio AM, Inoue T, Lingsma HF, Beers SR, Gordon WA, Valadka AB, Manley GT, Okonkwo DO, TRACK-TBI Investigators
• The impact of previous traumatic brain injury on health and functioning: a TRACK-TBI study.
  Journal of neurotrauma 2013 Dams-O'Connor K, Spielman L, Singh A, Gordon WA, Lingsma HF, Maas AI, Manley GT, Mukherjee P, Okonkwo DO, Puccio AM, Schnyer DM, Valadka AB, Yue JK, Yuh EL, TRACK-TBI Investigators
• Acute biomarkers of traumatic brain injury: relationship between plasma levels of ubiquitin C-terminal hydrolase-L1 and glial fibrillary acidic protein.
  Journal of neurotrauma 2013 Diaz-Arrastia R, Wang KK, Papa L, Sorani MD, Yue JK, Puccio AM, McMahon PJ, Inoue T, Yuh EL, Lingsma HF, Maas AI, Valadka AB, Okonkwo DO, Manley GT, TRACK-TBI Investigators
• Transforming research and clinical knowledge in traumatic brain injury pilot: multicenter implementation of the common data elements for traumatic brain injury.
  Journal of neurotrauma 2013 Yue JK, Vassar MJ, Lingsma HF, Cooper SR, Okonkwo DO, Valadka AB, Gordon WA, Maas AI, Mukherjee P, Yuh EL, Puccio AM, Schnyer DM, Manley GT, TRACK-TBI Investigators
• Pediatric brain injury: can DTI scalars predict functional outcome?
  Pediatric radiology 2013 Xu D, Mukherjee P, Barkovich AJ
• Test-retest reliability of computational network measurements derived from the structural connectome of the human brain.
  Brain connectivity 2013 Owen JP, Ziv E, Bukshpun P, Pojman N, Wakahiro M, Berman JI, Roberts TP, Friedman EJ, Sherr EH, Mukherjee P
• A 600 kb deletion syndrome at 16p11.2 leads to energy imbalance and neuropsychiatric disorders.
  Journal of medical genetics 2012 Zufferey F, Sherr EH, Beckmann ND, Hanson E, Maillard AM, Hippolyte L, Macé A, Ferrari C, Kutalik Z, Andrieux J, Aylward E, Barker M, Bernier R, Bouquillon S, Conus P, Delobel B, Faucett WA, Goin-…
• The role of corpus callosum development in functional connectivity and cognitive processing.
  PloS one 2012 Hinkley LB, Marco EJ, Findlay AM, Honma S, Jeremy RJ, Strominger Z, Bukshpun P, Wakahiro M, Brown WS, Paul LK, Barkovich AJ, Mukherjee P, Nagarajan SS, Sherr EH
• Epileptic foci.
  Journal of neurosurgery 2011 Hess CP, Mukherjee P, Barbaro NM
• Common data elements in radiologic imaging of traumatic brain injury.
  Archives of physical medicine and rehabilitation 2010 Duhaime AC, Gean AD, Haacke EM, Hicks R, Wintermark M, Mukherjee P, Brody D, Latour L, Riedy G, Common Data Elements Neuroimaging Working Group Members, Pediatric Working Group Members
• Common data elements in radiologic imaging of traumatic brain injury.
  Journal of magnetic resonance imaging : JMRI 2010 Haacke EM, Duhaime AC, Gean AD, Riedy G, Wintermark M, Mukherjee P, Brody DL, DeGraba T, Duncan TD, Elovic E, Hurley R, Latour L, Smirniotopoulos JG, Smith DH
• Diffusion tensor imaging of Aicardi syndrome.
  Pediatric neurology 2010 Wahl M, Strominger ZA, Wakahiro M, Jeremy RJ, Mukherjee P, Sherr EH
• Spatial HARDI: improved visualization of complex white matter architecture with Bayesian spatial regularization.
  NeuroImage 2010 Raj A, Hess C, Mukherjee P
• Visual tracking synchronization as a metric for concussion screening.
  The Journal of head trauma rehabilitation 2010 Maruta J, Suh M, Niogi SN, Mukherjee P, Ghajar J
• Individual Differences in Distinct Components of Attention are Linked to Anatomical Variations in Distinct White Matter Tracts.
  Frontiers in neuroanatomy 2010 Niogi S, Mukherjee P, Ghajar J, McCandliss BD
• Epidemiology of travel-associated pandemic (H1N1) 2009 infection in 116 patients, Singapore.
  Emerging infectious diseases 2010 Mukherjee P, Lim PL, Chow A, Barkham T, Seow E, Win MK, Chua A, Leo YS, Cheng Chen MI
• Diffusion imaging and tractography of congenital brain malformations.
  Pediatric radiology 2009 Wahl M, Barkovich AJ, Mukherjee P
• Diffusion imaging of congenital brain malformations.
  Seminars in pediatric neurology 2009 Wahl M, Mukherjee P
• Reply:.
  American Journal of Neuroradiology 2009 P. Mukherjee, M. Wahl, A.J. Barkovich
• Clinical applications of MR diffusion and perfusion imaging: Preface.
  Magnetic resonance imaging clinics of North America 2009 Reeder SB, Mukherjee P
• High-resolution phased-array MRI of the human brain at 7 tesla: initial experience in multiple sclerosis patients.
  Journal of neuroimaging : official journal of the American Society of Neuroimaging 2009 Metcalf M, Xu D, Okuda DT, Carvajal L, Srinivasan R, Kelley DA, Mukherjee P, Nelson SJ, Vigneron DB, Pelletier D
• Advances in neuroimaging of traumatic brain injury and posttraumatic stress disorder.
  Journal of rehabilitation research and development 2009 Van Boven RW, Harrington GS, Hackney DB, Ebel A, Gauger G, Bremner JD, D'Esposito M, Detre JA, Haacke EM, Jack CR, Jagust WJ, Le Bihan D, Mathis CA, Mueller S, Mukherjee P, Schuff N, Chen A, Weiner MW
• Physiological MR imaging of normal development and developmental delay.
  Clinical MR Neuroimaging 2009 A. James Barkovich, Pratik Mukherjee, Daniel B. Vigneron
• Focal lesions in acute mild traumatic brain injury and neurocognitive outcome: CT versus 3T MRI.
  Journal of neurotrauma 2008 Lee H, Wintermark M, Gean AD, Ghajar J, Manley GT, Mukherjee P
• High-resolution intracranial MRA at 7T using autocalibrating parallel imaging: initial experience in vascular disease patients.
  Magnetic resonance imaging 2008 von Morze C, Purcell DD, Banerjee S, Xu D, Mukherjee P, Kelley DA, Majumdar S, Vigneron DB
• Phased array 3D MR spectroscopic imaging of the brain at 7 T.
  Magnetic resonance imaging 2008 Xu D, Cunningham CH, Chen AP, Li Y, Kelley DA, Mukherjee P, Pauly JM, Nelson SJ, Vigneron DB
• Diffusion tensor MR imaging and fiber tractography: technical considerations.
  AJNR. American journal of neuroradiology 2008 Mukherjee P, Chung SW, Berman JI, Hess CP, Henry RG
• Diffusion tensor MR imaging and fiber tractography: theoretic underpinnings.
  AJNR. American journal of neuroradiology 2008 Mukherjee P, Berman JI, Chung SW, Hess CP, Henry RG
• A framework for in vivo quantification of regional brain folding in premature neonates.
  NeuroImage 2008 Rodriguez-Carranza CE, Mukherjee P, Vigneron D, Barkovich J, Studholme C
• Brain metabolite levels assessed by lactate-edited MR spectroscopy in premature neonates with and without pentobarbital sedation.
  AJNR. American journal of neuroradiology 2008 Wang ZJ, Vigneron DB, Miller SP, Mukherjee P, Charlton NN, Lu Y, Barkovich AJ
• Development of a robust method for generating 7.0 T multichannel phase images of the brain with application to normal volunteers and patients with neurological diseases.
  NeuroImage 2007 Hammond KE, Lupo JM, Xu D, Metcalf M, Kelley DA, Pelletier D, Chang SM, Mukherjee P, Vigneron DB, Nelson SJ
• Visualizing white matter pathways in the living human brain: diffusion tensor imaging and beyond.
  Neuroimaging clinics of North America 2007 Hess CP, Mukherjee P
• Intracranial time-of-flight MR angiography at 7T with comparison to 3T.
  Journal of magnetic resonance imaging : JMRI 2007 von Morze C, Xu D, Purcell DD, Hess CP, Mukherjee P, Saloner D, Kelley DA, Vigneron DB
• Probabilistic streamline q-ball tractography using the residual bootstrap.
  NeuroImage 2007 Berman JI, Chung S, Mukherjee P, Hess CP, Han ET, Henry RG
• Agenesis of the corpus callosum, optic coloboma, intractable seizures, craniofacial and skeletal dysmorphisms: an autosomal recessive disorder similar to Temtamy syndrome.
  American journal of medical genetics. Part A 2007 Li J, Shivakumar S, Wakahiro M, Mukherjee P, Barkovich AJ, Slavotinek A, Sherr EH
• Development and initial evaluation of 7-T q-ball imaging of the human brain.
  Magnetic resonance imaging 2007 Mukherjee P, Hess CP, Xu D, Han ET, Kelley DA, Vigneron DB
• Agenesis of the corpus callosum: genetic, developmental and functional aspects of connectivity.
  Nature reviews. Neuroscience 2007 Paul LK, Brown WS, Adolphs R, Tyszka JM, Richards LJ, Mukherjee P, Sherr EH
• An eight-channel, nonoverlapping phased array coil with capacitive decoupling for parallel MRI at 3 T.
  Concepts in Magnetic Resonance Part B 2007 Cornelius von Morze, James Tropp, Suchandrima Banerjee, Duan Xu, Kostas Karpodinis, Lucas Carvajal, Christopher P. Hess, Pratik Mukherjee, Sharmila Majumdar, Daniel B. Vigneron
• Diffusion tensor imaging segmentation of white matter structures using a Reproducible Objective Quantification Scheme (ROQS).
  NeuroImage 2007 Niogi SN, Mukherjee P, McCandliss BD
• Restricted diffusion in bilateral optic nerves and retinas as an indicator of venous ischemia caused by cavernous sinus thrombophlebitis.
  AJNR. American journal of neuroradiology 2006 Chen JS, Mukherjee P, Dillon WP, Wintermark M
• Q-ball reconstruction of multimodal fiber orientations using the spherical harmonic basis.
  Magnetic resonance in medicine 2006 Hess CP, Mukherjee P, Han ET, Xu D, Vigneron DB
• Pyramidal tract maturation after brain injury in newborns with heart disease.
  Annals of neurology 2006 Partridge SC, Vigneron DB, Charlton NN, Berman JI, Henry RG, Mukherjee P, McQuillen PS, Karl TR, Barkovich AJ, Miller SP
• MR imaging, MR spectroscopy, and diffusion tensor imaging of sequential studies in neonates with encephalopathy.
  AJNR. American journal of neuroradiology 2006 Barkovich AJ, Miller SP, Bartha A, Newton N, Hamrick SE, Mukherjee P, Glenn OA, Xu D, Partridge JC, Ferriero DM, Vigneron DB
• Diffusion tensor imaging and tractography of human brain development.
  Neuroimaging clinics of North America 2006 Mukherjee P, McKinstry RC
• Preface.
  Neuroimaging Clinics of North America 2006 Pratik Mukherjee
• A system for measuring regional surface folding of the neonatal brain from MRI.
  Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention 2006 Rodriguez-Carranza C, Mukherjee P, Vigneron D, Barkovich J, Studholme C
• Early brain injury in premature newborns detected with magnetic resonance imaging is associated with adverse early neurodevelopmental outcome.
  The Journal of pediatrics 2005 Miller SP, Ferriero DM, Leonard C, Piecuch R, Glidden DV, Partridge JC, Perez M, Mukherjee P, Vigneron DB, Barkovich AJ
• Quantitative diffusion tensor MRI fiber tractography of sensorimotor white matter development in premature infants.
  NeuroImage 2005 Berman JI, Mukherjee P, Partridge SC, Miller SP, Ferriero DM, Barkovich AJ, Vigneron DB, Henry RG
• Tractography-based quantitation of diffusion tensor imaging parameters in white matter tracts of preterm newborns.
  Journal of magnetic resonance imaging : JMRI 2005 Partridge SC, Mukherjee P, Berman JI, Henry RG, Miller SP, Lu Y, Glenn OA, Ferriero DM, Barkovich AJ, Vigneron DB
• Comparing microstructural and macrostructural development of the cerebral cortex in premature newborns: diffusion tensor imaging versus cortical gyration.
  NeuroImage 2005 Deipolyi AR, Mukherjee P, Gill K, Henry RG, Partridge SC, Veeraraghavan S, Jin H, Lu Y, Miller SP, Ferriero DM, Vigneron DB, Barkovich AJ
• Diffusion tensor imaging and fiber tractography in acute stroke.
  Neuroimaging clinics of North America 2005 Mukherjee P
• Diffusion Tensor Imaging with Three-dimensional Fiber Tractography of Traumatic Axonal Shearing Injury: An Imaging Correlate for the Posterior Callosal "Disconnection" Syndrome: Case Report.
  Neurosurgery 2005 Le TH, Mukherjee P, Henry RG, Berman JI, Ware M, Manley GT
• Diffusion tensor imaging with three-dimensional fiber tractography of traumatic axonal shearing injury: an imaging correlate for the posterior callosal "disconnection" syndrome: case report.
  Neurosurgery 2005 Le TH, Mukherjee P, Henry RG, Berman JI, Ware M, Manley GT
• Hand somatosensory cortex activity following selective dorsal rhizotomy: report of three cases with fMRI.
  Child's nervous system : ChNS : official journal of the International Society for Pediatric Neurosurgery 2004 Ojemann JG, McKinstry RC, Mukherjee P, Park TS, Burton H
• Diffusion tensor imaging: serial quantitation of white matter tract maturity in premature newborns.
  NeuroImage 2004 Partridge SC, Mukherjee P, Henry RG, Miller SP, Berman JI, Jin H, Lu Y, Glenn OA, Ferriero DM, Barkovich AJ, Vigneron DB
• Diffusion-tensor imaging-guided tracking of fibers of the pyramidal tract combined with intraoperative cortical stimulation mapping in patients with gliomas.
  Journal of neurosurgery 2004 Berman JI, Berger MS, Mukherjee P, Henry RG
• Early laminar organization of the human cerebrum demonstrated with diffusion tensor imaging in extremely premature infants.
  NeuroImage 2004 Maas LC, Mukherjee P, Carballido-Gamio J, Veeraraghavan S, Miller SP, Partridge SC, Henry RG, Barkovich AJ, Vigneron DB
• Single-shot fast spin-echo diffusion tensor imaging of the brain and spine with head and phased array coils at 1.5 T and 3.0 T.
  Magnetic resonance imaging 2004 Xu D, Henry RG, Mukherjee P, Carvajal L, Miller SP, Barkovich AJ, Vigneron DB
• Unilateral putaminal CT, MR, and diffusion abnormalities secondary to nonketotic hyperglycemia in the setting of acute neurologic symptoms mimicking stroke.
  AJNR. American journal of neuroradiology 2004 Wintermark M, Fischbein NJ, Mukherjee P, Yuh EL, Dillon WP
• Vitamin B12 deficiency.
  Archives of neurology 2004 Nakamura K, Mukherjee P, Swanson RA
• Subcortical pathways serving cortical language sites: initial experience with diffusion tensor imaging fiber tracking combined with intraoperative language mapping.
  NeuroImage 2004 Henry RG, Berman JI, Nagarajan SS, Mukherjee P, Berger MS
• Physiological MRI of normal development and developmental delay.
  Clinical MR Neuroimaging 2004 A. James Barkovich, Pratik Mukherjee, Daniel B. Vigneron
• Diffusion-weighted imaging of acute corticospinal tract injury preceding Wallerian degeneration in the maturing human brain.
  AJNR. American journal of neuroradiology 2003 Mazumdar A, Mukherjee P, Miller JH, Malde H, McKinstry RC
• Measurement of cerebral blood flow in chronic carotid occlusive disease: comparison of dynamic susceptibility contrast perfusion MR imaging with positron emission tomography.
  AJNR. American journal of neuroradiology 2003 Mukherjee P, Kang HC, Videen TO, McKinstry RC, Powers WJ, Derdeyn CP
• Diffusion-tensor MR imaging of normal brain maturation: a guide to structural development and myelination.
  AJR. American journal of roentgenology 2003 Miller JH, McKinstry RC, Philip JV, Mukherjee P, Neil JJ
• Diffusion tensor imaging of normal and injured developing human brain - a technical review.
  NMR in biomedicine 2002 Neil J, Miller J, Mukherjee P, Hüppi PS
• Diffusion-tensor MR imaging of gray and white matter development during normal human brain maturation.
  AJNR. American journal of neuroradiology 2002 Mukherjee P, Miller JH, Shimony JS, Philip JV, Nehra D, Snyder AZ, Conturo TE, Neil JJ, McKinstry RC
• Normal brain maturation during childhood: developmental trends characterized with diffusion-tensor MR imaging.
  Radiology 2001 Mukherjee P, Miller JH, Shimony JS, Conturo TE, Lee BC, Almli CR, McKinstry RC
• Evaluating pediatric brain tumor cellularity with diffusion-tensor imaging.
  AJR. American journal of roentgenology 2001 Gauvain KM, McKinstry RC, Mukherjee P, Perry A, Neil JJ, Kaufman BA, Hayashi RJ
• Reversible posterior leukoencephalopathy syndrome: evaluation with diffusion-tensor MR imaging.
  Radiology 2001 Mukherjee P, McKinstry RC
• Differences between gray matter and white matter water diffusion in stroke: diffusion-tensor MR imaging in 12 patients.
  Radiology 2000 Mukherjee P, Bahn MM, McKinstry RC, Shimony JS, Cull TS, Akbudak E, Snyder AZ, Conturo TE
• Improving high-resolution MR bold venographic imaging using a T1 reducing contrast agent.
  Journal of magnetic resonance imaging : JMRI 1999 Lin W, Mukherjee P, An H, Yu Y, Wang Y, Vo K, Lee B, Kido D, Haacke EM
• MR high-resolution blood oxygenation level-dependent venography of occult (low-flow) vascular lesions.
  AJNR. American journal of neuroradiology 1999 Lee BC, Vo KD, Kido DK, Mukherjee P, Reichenbach J, Lin W, Yoon MS, Haacke M
• The maintained discharge of neurons in the cat lateral geniculate nucleus: spectral analysis and computational modeling.
  Visual neuroscience 1998 Mukherjee P, Kaplan E
• Tailoring of variability in the lateral geniculate nucleus of the cat.
  Biological cybernetics 1996 Levine MW, Cleland BG, Mukherjee P, Kaplan E
• Dynamics of neurons in the cat lateral geniculate nucleus: in vivo electrophysiology and computational modeling.
  Journal of neurophysiology 1995 Mukherjee P, Kaplan E