Leah Jarlsberg
Statistician
Medicine
School of Medicine

Education & Training

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• Survival analysis and repeated measures regression University of California San Francisco 2014
• Data management fundamentals workshop National Institute of Allergy and Infectious Disease (NIAID/NIH) 2011
• Data modeling and data warehousing University of California Berkeley 2001
• Regression and ANOVA SAS Institute 2000
• BA Anthropology University of California Berkeley 1997

Interests

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• data visualization
• tuberculosis
• data management
• regression
• statistics

Websites

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• UCSF Center for Tuberculosis (tb.ucsf.edu)
• Savic Lab (pharm.ucsf.edu)

Publications (54)

Top publication keywords:
Tuberculosis, PulmonaryMycobacterium tuberculosisAntibodies, FungalMycobacterium Infections, NontuberculousDNA, BacterialDirectly Observed TherapyMolecular EpidemiologyAIDS-Related Opportunistic InfectionsTuberculosis, Multidrug-ResistantTuberculosisMycobacterium kansasiiPneumocystis cariniiSan FranciscoAntitubercular AgentsPneumonia, Pneumocystis

• Inpatient pain alleviation after orthopaedic trauma surgery-are we doing a good job?
  European journal of orthopaedic surgery & traumatology : orthopedie traumatologie 2023 Marmor MT, Mahadevan V, Solans BP, Floren A, Jarlsberg L, Cohen I, Savic R
• Characterizing HIV-Preventive, Plasma Tenofovir Concentrations-A Pooled Participant-level Data Analysis From Human Immunodeficiency Virus Preexposure Prophylaxis Clinical Trials.
  Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2022 Garcia-Cremades M, Vucicevic K, Hendrix CW, Jayachandran P, Jarlsberg L, Grant R, Celum CL, Martin M, Baeten JM, Marrazzo J, Anderson P, Choopanya K, Vanichseni S, Glidden DV, Savic RM
• Examining nonadherence in the treatment of tuberculosis: The patterns that lead to failure.
  British journal of clinical pharmacology 2022 Fox WS, Strydom N, Imperial MZ, Jarlsberg L, Savic RM
• Modeling the Probability of HIV Infection over Time in High-Risk Seronegative Participants Receiving Placebo in Five Randomized Double-Blind Placebo-Controlled HIV Pre-Exposure Prophylaxis Trials: A Patient-Level Pooled Analysis.
  Pharmaceutics 2022 Garcia-Cremades M, Hendrix CW, Jayachandran P, Strydom N, Jarlsberg L, Grant R, Celum CL, Martin M, Baeten JM, Marrazzo J, Anderson P, Choopanya K, Vanichseni S, Glidden DV, Savic RM
• Identification of Mycobacterium tuberculosis Peptides in Serum Extracellular Vesicles from Persons with Latent Tuberculosis Infection.
  Journal of clinical microbiology 2020 Mehaffy C, Kruh-Garcia NA, Graham B, Jarlsberg LG, Willyerd CE, Borisov A, Sterling TR, Nahid P, Dobos KM

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• Magnitude of Mycobacterium tuberculosis transmission among household and non-household contacts of TB patients.
  The international journal of tuberculosis and lung disease : the official journal of the International Union against Tuberculosis and Lung Disease 2019 Kato-Maeda M, Choi JC, Jarlsberg LG, Grinsdale JA, Higashi J, Kawamura LM, Osmond DH, Hopewell PC
• Treatment correlates of successful outcomes in pulmonary multidrug-resistant tuberculosis: an individual patient data meta-analysis.
  Lancet (London, England) 2018 Collaborative Group for the Meta-Analysis of Individual Patient Data in MDR-TB treatment–2017, Ahmad N, Ahuja SD, Akkerman OW, Alffenaar JC, Anderson LF, Baghaei P, Bang D, Barry PM, Bastos ML, Behera…
• Adherence interventions and outcomes of tuberculosis treatment: A systematic review and meta-analysis of trials and observational studies.
  PLoS medicine 2018 Alipanah N, Jarlsberg L, Miller C, Linh NN, Falzon D, Jaramillo E, Nahid P
• Interplay of strain and race/ethnicity in the innate immune response to M. tuberculosis.
  PloS one 2018 Nahid P, Jarlsberg LG, Kato-Maeda M, Segal MR, Osmond DH, Gagneux S, Dobos K, Gold M, Hopewell PC, Lewinsohn DM
• Biomarkers of Tuberculosis Severity and Treatment Effect: A Directed Screen of 70 Host Markers in a Randomized Clinical Trial.
  EBioMedicine 2017 Sigal GB, Segal MR, Mathew A, Jarlsberg L, Wang M, Barbero S, Small N, Haynesworth K, Davis JL, Weiner M, Whitworth WC, Jacobs J, Schorey J, Lewinsohn DM, Nahid P
• Clinical and bacteriological characteristics associated with clustering of multidrug-resistant tuberculosis.
  The international journal of tuberculosis and lung disease : the official journal of the International Union against Tuberculosis and Lung Disease 2017 Feng JY, Jarlsberg LG, Salcedo K, Rose J, Janes M, Lin SG, Osmond DH, Jost KC, Soehnlen MK, Flood J, Graviss EA, Desmond E, Moonan PK, Nahid P, Hopewell PC, Kato-Maeda M
• Impact of Euro-American sublineages of Mycobacterium tuberculosis on new infections among named contacts.
  The international journal of tuberculosis and lung disease : the official journal of the International Union against Tuberculosis and Lung Disease 2017 Feng JY, Jarlsberg LG, Rose J, Grinsdale JA, Janes M, Higashi J, Osmond DH, Nahid P, Hopewell PC, Kato-Maeda M
• Surgery as an Adjunctive Treatment for Multidrug-Resistant Tuberculosis: An Individual Patient Data Metaanalysis.
  Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2016 Fox GJ, Mitnick CD, Benedetti A, Chan ED, Becerra M, Chiang CY, Keshavjee S, Koh WJ, Shiraishi Y, Viiklepp P, Yim JJ, Pasvol G, Robert J, Shim TS, Shin SS, Menzies D, Collaborative Group for Meta-…
• A Clinical Predictor Score for 30-Day Mortality among HIV-Infected Adults Hospitalized with Pneumonia in Uganda.
  PloS one 2015 Koss CA, Jarlsberg LG, den Boon S, Cattamanchi A, Davis JL, Worodria W, Ayakaka I, Sanyu I, Huang L, International HIV-associated Opportunistic Pneumonias (IHOP) Study
• Reduced sensitivity of the QuantiFERON(®) test in diabetic patients with smear-negative tuberculosis.
  The international journal of tuberculosis and lung disease : the official journal of the International Union against Tuberculosis and Lung Disease 2015 Choi JC, Jarlsberg LG, Grinsdale JA, Osmond DH, Higashi J, Hopewell PC, Kato-Maeda M
• Association between diabetes mellitus and tuberculosis in United States-born and foreign-born populations in San Francisco.
  PloS one 2014 Suwanpimolkul G, Grinsdale JA, Jarlsberg LG, Higashi J, Osmond DH, Hopewell PC, Kato-Maeda M
• Non-tuberculous mycobacterial infections at San Francisco General Hospital.
  The clinical respiratory journal 2014 Sheu LC, Tran TM, Jarlsberg LG, Marras TK, Daley CL, Nahid P
• Childhood tuberculosis in northern Viet Nam: a review of 103 cases.
  PloS one 2014 Blount RJ, Tran B, Jarlsberg LG, Phan H, Thanh Hoang V, Nguyen NV, Lewinsohn DA, Nahid P
• Pyrazinamide resistance, Mycobacterium tuberculosis lineage and treatment outcomes in San Francisco, California.
  PloS one 2014 Budzik JM, Jarlsberg LG, Higashi J, Grinsdale J, Hopewell PC, Kato-Maeda M, Nahid P
• The lung microbiome of Ugandan HIV-infected pneumonia patients is compositionally and functionally distinct from that of San Franciscan patients.
  PloS one 2014 Iwai S, Huang D, Fong S, Jarlsberg LG, Worodria W, Yoo S, Cattamanchi A, Davis JL, Kaswabuli S, Segal M, Huang L, Lynch SV
• Aptamer-based proteomic signature of intensive phase treatment response in pulmonary tuberculosis.
  Tuberculosis (Edinburgh, Scotland) 2014 Nahid P, Bliven-Sizemore E, Jarlsberg LG, De Groote MA, Johnson JL, Muzanyi G, Engle M, Weiner M, Janjic N, Sterling DG, Ochsner UA
• Procalcitonin predicts mortality in HIV-infected Ugandan adults with lower respiratory tract infections.
  Respirology (Carlton, Vic.) 2014 Tokman S, Barnett CF, Jarlsberg LG, Taub PR, den Boon S, Davis JL, Cattamanchi A, Worodria W, Maisel A, Huang L, International HIV-Associated Opportunistic Pneumonias (IHOP) Study Group
• Ambient air pollution associated with suppressed serologic responses to Pneumocystis jirovecii in a prospective cohort of HIV-infected patients with Pneumocystis pneumonia.
  PloS one 2013 Blount RJ, Djawe K, Daly KR, Jarlsberg LG, Fong S, Balmes J, Miller RF, Walzer PD, Huang L, International HIV-associated Opportunistic Pneumonias Study
• Antibody responses against Pneumocystis jirovecii in health care workers over time.
  Emerging infectious diseases 2013 Fong S, Daly KR, Tipirneni R, Jarlsberg LG, Djawe K, Koch JV, Swartzman A, Roth B, Walzer PD, Huang L
• Sublineages of lineage 4 (Euro-American) Mycobacterium tuberculosis differ in genotypic clustering.
  The international journal of tuberculosis and lung disease : the official journal of the International Union against Tuberculosis and Lung Disease 2013 Anderson J, Jarlsberg LG, Grindsdale J, Osmond D, Kawamura M, Hopewell PC, Kato-Maeda M
• Molecular epidemiology of tuberculosis in foreign-born persons living in San Francisco.
  American journal of respiratory and critical care medicine 2013 Suwanpimolkul G, Jarlsberg LG, Grinsdale JA, Osmond D, Kawamura LM, Hopewell PC, Kato-Maeda M
• Elucidating novel serum biomarkers associated with pulmonary tuberculosis treatment.
  PloS one 2013 De Groote MA, Nahid P, Jarlsberg L, Johnson JL, Weiner M, Muzanyi G, Janjic N, Sterling DG, Ochsner UA
• Dihydropteroate synthase mutations in Pneumocystis pneumonia: impact of applying different definitions of prophylaxis, mortality endpoints and mutant in a single cohort.
  Medical mycology 2013 Yoon C, Subramanian A, Chi A, Crothers K, Meshnick SR, Taylor SM, Beard CB, Jarlsberg LG, Lawrence GG, Avery M, Swartzman A, Fong S, Roth B, Huang L, International HIV-Associated Opportunistic …
• Serologic responses to recombinant Pneumocystis jirovecii major surface glycoprotein among Ugandan patients with respiratory symptoms.
  PloS one 2012 Blount RJ, Jarlsberg LG, Daly KR, Worodria W, Davis JL, Cattamanchi A, Djawe K, Andama A, Koch J, Walzer PD, Huang L, International HIV-Associated Opportunistic Pneumonias (IHOP) Study
• Environmental risk factors for Pneumocystis pneumonia hospitalizations in HIV patients.
  Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2012 Djawe K, Levin L, Swartzman A, Fong S, Roth B, Subramanian A, Grieco K, Jarlsberg L, Miller RF, Huang L, Walzer PD
• Multidrug resistant pulmonary tuberculosis treatment regimens and patient outcomes: an individual patient data meta-analysis of 9,153 patients.
  PLoS medicine 2012 Ahuja SD, Ashkin D, Avendano M, Banerjee R, Bauer M, Bayona JN, Becerra MC, Benedetti A, Burgos M, Centis R, Chan ED, Chiang CY, Cox H, D'Ambrosio L, DeRiemer K, Dung NH, Enarson D, Falzon D, Flanagan…
• Beijing sublineages of Mycobacterium tuberculosis differ in pathogenicity in the guinea pig.
  Clinical and vaccine immunology : CVI 2012 Kato-Maeda M, Shanley CA, Ackart D, Jarlsberg LG, Shang S, Obregon-Henao A, Harton M, Basaraba RJ, Henao-Tamayo M, Barrozo JC, Rose J, Kawamura LM, Coscolla M, Fofanov VY, Koshinsky H, Gagneux S, …
• Racial differences in tuberculosis infection in United States communities: the coronary artery risk development in young adults study.
  Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2011 Nahid P, Horne DJ, Jarlsberg LG, Reiner AP, Osmond D, Hopewell PC, Bibbins-Domingo K
• Factors associated with mortality in patients with drug-susceptible pulmonary tuberculosis.
  BMC infectious diseases 2011 Nahid P, Jarlsberg LG, Rudoy I, de Jong BC, Unger A, Kawamura LM, Osmond DH, Hopewell PC, Daley CL
• Serum antibody levels to the Pneumocystis jirovecii major surface glycoprotein in the diagnosis of P. jirovecii pneumonia in HIV+ patients.
  PloS one 2010 Djawe K, Huang L, Daly KR, Levin L, Koch J, Schwartzman A, Fong S, Roth B, Subramanian A, Grieco K, Jarlsberg L, Walzer PD
• Differences among sublineages of the East-Asian lineage of Mycobacterium tuberculosis in genotypic clustering.
  The international journal of tuberculosis and lung disease : the official journal of the International Union against Tuberculosis and Lung Disease 2010 Kato-Maeda M, Kim EY, Flores L, Jarlsberg LG, Osmond D, Hopewell PC
• A randomized controlled trial to evaluate the effectiveness of a distance asthma learning program for pediatricians.
  The Journal of asthma : official journal of the Association for the Care of Asthma 2010 Le TT, Rait MA, Jarlsberg LG, Eid NS, Cabana MD
• Comparison of restriction fragment length polymorphism with the polymorphic guanine-cytosine-rich sequence and spoligotyping for differentiation of Mycobacterium tuberculosis isolates with five or fewer copies of IS6110.
  Journal of clinical microbiology 2009 Flores L, Jarlsberg LG, Kim EY, Osmond D, Grinsdale J, Kawamura M, Desmond E, Hopewell PC, Kato-Maeda M
• Predicting mortality from HIV-associated Pneumocystis pneumonia at illness presentation: an observational cohort study.
  Thorax 2009 Fei MW, Kim EJ, Sant CA, Jarlsberg LG, Davis JL, Swartzman A, Huang L
• Healthcare worker occupation and immune response to Pneumocystis jirovecii.
  Emerging infectious diseases 2009 Tipirneni R, Daly KR, Jarlsberg LG, Koch JV, Swartzman A, Roth BM, Walzer PD, Huang L
• Clinical characteristics and treatment outcomes of patients with isoniazid-monoresistant tuberculosis.
  Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2009 Cattamanchi A, Dantes RB, Metcalfe JZ, Jarlsberg LG, Grinsdale J, Kawamura LM, Osmond D, Hopewell PC, Nahid P
• Severity and outcomes of Pneumocystis pneumonia in patients newly diagnosed with HIV infection: an observational cohort study.
  Scandinavian journal of infectious diseases 2009 Fei MW, Sant CA, Kim EJ, Swartzman A, Davis JL, Jarlsberg LG, Huang L
• At what age do children start taking daily asthma medicines on their own?
  Pediatrics 2008 Orrell-Valente JK, Jarlsberg LG, Hill LG, Cabana MD
• Parent Perception of Their Child's Asthma Control and Concurrent Complementary and Alternative Medicine Use.
  Pediatric Allergy Immunology and Pulmonology 2008 Michael D. Cabana, Anurekha Gollapudi, Leah G. Jarlsberg, Megumi J. Okumura, Michelle Rait, Noreen M. Clark
• Selective provision of asthma self-management tools to families.
  Pediatrics 2008 Cabana MD, Chaffin DC, Jarlsberg LG, Thyne SM, Clark NM
• Detailed analysis of the radiographic presentation of Mycobacterium kansasii lung disease in patients with HIV infection.
  Chest 2008 Cattamanchi A, Nahid P, Marras TK, Gotway MB, Lee TJ, Gonzalez LC, Morris A, Webb WR, Osmond DH, Daley CL
• Parents' specific concerns about daily asthma medications for children.
  The Journal of asthma : official journal of the Association for the Care of Asthma 2007 Orrell-Valente JK, Jarlsberg LG, Rait MA, Thyne SM, Rubash T, Cabana MD
• Treatment outcomes of patients with HIV and tuberculosis.
  American journal of respiratory and critical care medicine 2007 Nahid P, Gonzalez LC, Rudoy I, de Jong BC, Unger A, Kawamura LM, Osmond DH, Hopewell PC, Daley CL
• Tuberculosis in healthcare workers: a molecular epidemiologic study in San Francisco.
  Infection control and hospital epidemiology 2006 Ong A, Rudoy I, Gonzalez LC, Creasman J, Kawamura LM, Daley CL
• A 13-year molecular epidemiological analysis of tuberculosis in San Francisco.
  The international journal of tuberculosis and lung disease : the official journal of the International Union against Tuberculosis and Lung Disease 2006 Cattamanchi A, Hopewell PC, Gonzalez LC, Osmond DH, Masae Kawamura L, Daley CL, Jasmer RM
• Treatment of multidrug-resistant tuberculosis in San Francisco: an outpatient-based approach.
  Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2005 Burgos M, Gonzalez LC, Paz EA, Gournis E, Kawamura LM, Schecter G, Hopewell PC, Daley CL
• Mortality prediction in pulmonary Mycobacterium kansasii infection and human immunodeficiency virus.
  American journal of respiratory and critical care medicine 2004 Marras TK, Morris A, Gonzalez LC, Daley CL
• Tuberculosis treatment outcomes: directly observed therapy compared with self-administered therapy.
  American journal of respiratory and critical care medicine 2004 Jasmer RM, Seaman CB, Gonzalez LC, Kawamura LM, Osmond DH, Daley CL
• A molecular epidemiological assessment of extrapulmonary tuberculosis in San Francisco.
  Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2003 Ong A, Creasman J, Hopewell PC, Gonzalez LC, Wong M, Jasmer RM, Daley CL