Katherine Williams, PhD
Employee of Affiliated Org.
Medicine
School of Medicine

Education & Training

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• Certificate in Project Management Business, Technology and Engineering University of California Berkeley Extension
• B.S. Biological Sciences University of Illinois at Chicago
• Ph.D. Molecular Biology University of Illinois at Chicago

Websites

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• Center for Healthcare Improvement and Medical Effectiveness - CHIME (chime.ucsf.edu)

Publications (30)

Top publication keywords:
PhenolsMammary Glands, AnimalOmentumEndometriosisBenzhydryl CompoundsEnvironmental PollutantsBronchoalveolar Lavage FluidProteomeBlood ProteinsProteomicsContraceptives, Oral, HormonalOrganoidsAscitic FluidRespiratory MucosaMass Spectrometry

• Implementing TeleSleep at Veterans Healthcare Administration: an organizational case study of adaptation and sustainment.
  Frontiers in sleep 2024 Belkora JK, Reichert J, Williams K, Whooley MA, Rezayat T, Sorensen S, Chilakamarri P, Sanders E, Maas A, Gomez A, Kurien P, Ashbrook L, Thomas J, Sarmiento KF
• Sustainment of the TeleSleep program for rural veterans.
  Frontiers in health services 2023 Belkora JK, Ortiz DeBoque L, Folmer RL, Totten AM, Williams K, Whooley MA, Boudreau E, Atwood CW, Zeidler M, Rezayat T, Chilakamarri P, Sarmiento KF
• Proteomic analyses of primary human villous trophoblasts exposed to flame retardant BDE-47 using SWATH-MS.
  Toxicology 2023 Chen H, Williams KE, Kwan EY, Kapidzic M, Puckett KA, San A, Fisher SJ, Robinson JF
• Veterans Health Administration TeleSleep Enterprise-Wide Initiative 2017-2020: bringing sleep care to our nation's veterans.
  Journal of clinical sleep medicine : JCSM : official publication of the American Academy of Sleep Medicine 2023 Chun VS, Whooley MA, Williams K, Zhang N, Zeidler MR, Atwood CW, Folmer RL, Totten AM, Smith CJ, Boudreau EA, Reichert JM, Sarmiento KF
• Veterans Health Administration response to 2021 recall of Philips Respironics devices: A case study.
  Frontiers in sleep 2023 Belkora JK, Fields B, Shamim-Uzzaman QA, Stratford D, Alfandre D, Hollingshaus S, Yackel E, Geppert C, Nechanicky P, Nichols A, Williams K, Reichert J, Whooley MA, Francis J, Sarmiento KF

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• Bisphenol A replacement chemicals, BPF and BPS, induce protumorigenic changes in human mammary gland organoid morphology and proteome.
  Proceedings of the National Academy of Sciences of the United States of America 2022 Winkler J, Liu P, Phong K, Hinrichs JH, Ataii N, Williams K, Hadler-Olsen E, Samson S, Gartner ZJ, Fisher S, Werb Z
• Global proteomic analyses of human cytotrophoblast differentiation/invasion.
  Development (Cambridge, England) 2021 Chen H, Williams KE, Kwan EY, Kapidzic M, Puckett KA, Aburajab RK, Robinson JF, Fisher SJ
• Leveraging Telehealth to improve access to care: a qualitative evaluation of Veterans' experience with the VA TeleSleep program.
  BMC health services research 2021 Nicosia FM, Kaul B, Totten AM, Silvestrini MC, Williams K, Whooley MA, Sarmiento KF
• Blood factors transfer beneficial effects of exercise on neurogenesis and cognition to the aged brain.
  Science (New York, N.Y.) 2020 Horowitz AM, Fan X, Bieri G, Smith LK, Sanchez-Diaz CI, Schroer AB, Gontier G, Casaletto KB, Kramer JH, Williams KE, Villeda SA
• Alterations in the Salivary Proteome and N-Glycome of Sjögren's Syndrome Patients.
  Journal of proteome research 2017 Hall SC, Hassis ME, Williams KE, Albertolle ME, Prakobphol A, Dykstra AB, Laurance M, Ona K, Niles RK, Prasad N, Gormley M, Shiboski C, Criswell LA, Witkowska HE, Fisher SJ
• Quantitative proteomic analyses of mammary organoids reveals distinct signatures after exposure to environmental chemicals.
  Proceedings of the National Academy of Sciences of the United States of America 2016 Williams KE, Lemieux GA, Hassis ME, Olshen AB, Fisher SJ, Werb Z
• Mass spectrometry-based analyses showing the effects of secretor and blood group status on salivary N-glycosylation.
  Clinical proteomics 2015 Albertolle ME, Hassis ME, Ng CJ, Cuison S, Williams K, Prakobphol A, Dykstra AB, Hall SC, Niles RK, Ewa Witkowska H, Fisher SJ
• Evaluating the effects of preanalytical variables on the stability of the human plasma proteome.
  Analytical biochemistry 2015 Hassis ME, Niles RK, Braten MN, Albertolle ME, Ewa Witkowska H, Hubel CA, Fisher SJ, Williams KE
• Proteomic analysis of human follicular fluid from fertile women.
  Clinical proteomics 2015 Zamah AM, Hassis ME, Albertolle ME, Williams KE
• Urine, peritoneal fluid and omental fat proteomes of reproductive age women: Endometriosis-related changes and associations with endocrine disrupting chemicals.
  Journal of proteomics 2014 Williams KE, Miroshnychenko O, Johansen EB, Niles RK, Sundaram R, Kannan K, Albertolle M, Zhou Y, Prasad N, Drake PM, Giudice LC, Hall SC, Witkowska HE, Buck Louis GM, Fisher SJ
• Protein composition of bronchoalveolar lavage fluid and airway surface liquid from newborn pigs.
  American journal of physiology. Lung cellular and molecular physiology 2013 Bartlett JA, Albertolle ME, Wohlford-Lenane C, Pezzulo AA, Zabner J, Niles RK, Fisher SJ, McCray PB, Williams KE
• Lectin chromatography/mass spectrometry discovery workflow identifies putative biomarkers of aggressive breast cancers.
  Journal of proteome research 2012 Drake PM, Schilling B, Niles RK, Prakobphol A, Li B, Jung K, Cho W, Braten M, Inerowicz HD, Williams K, Albertolle M, Held JM, Iacovides D, Sorensen DJ, Griffith OL, Johansen E, Zawadzka AM, Cusack MP…
• Covalent attachment and dissociative loss of sinapinic acid to/from cysteine-containing proteins from bacterial cell lysates analyzed by MALDI-TOF-TOF mass spectrometry.
  Journal of the American Society for Mass Spectrometry 2010 Fagerquist CK, Garbus BR, Williams KE, Bates AH, Harden LA
• A HUPO test sample study reveals common problems in mass spectrometry-based proteomics.
  Nature methods 2009 Bell AW, Deutsch EW, Au CE, Kearney RE, Beavis R, Sechi S, Nilsson T, Bergeron JJ, HUPO Test Sample Working Group
• Web-based software for rapid top-down proteomic identification of protein biomarkers, with implications for bacterial identification.
  Applied and environmental microbiology 2009 Fagerquist CK, Garbus BR, Williams KE, Bates AH, Boyle S, Harden LA
• Low molecular weight proteins in urines from healthy subjects as well as diabetic, nephropathic and diabetic-nephropathic patients: a MALDI study.
  Journal of mass spectrometry : JMS 2009 Lapolla A, Seraglia R, Molin L, Williams K, Cosma C, Reitano R, Sechi A, Ragazzi E, Traldi P
• A "tagless" strategy for identification of stable protein complexes genome-wide by multidimensional orthogonal chromatographic separation and iTRAQ reagent tracking.
  Journal of proteome research 2008 Dong M, Yang LL, Williams K, Fisher SJ, Hall SC, Biggin MD, Jin J, Witkowska HE
• A peptide with a ProGln C terminus in the human saliva peptidome exerts bactericidal activity against Propionibacterium acnes.
  Antimicrobial agents and chemotherapy 2008 Huang CM, Torpey JW, Liu YT, Chen YR, Williams KE, Komives EA, Gallo RL
• Proteome changes in ovarian epithelial cells derived from women with BRCA1 mutations and family histories of cancer.
  Molecular & cellular proteomics : MCP 2004 Smith-Beckerman DM, Fung KW, Williams KE, Auersperg N, Godwin AK, Burlingame AL
• Differential protein expression in MCF7 breast cancer cells transfected with ErbB2, neomycin resistance and luciferase plus yellow fluorescent protein.
  Proteomics 2004 Wang D, Jensen RH, Williams KE, Pallavicini MG
• Attomole detection of in vivo protein targets of benzene in mice: evidence for a highly reactive metabolite.
  Molecular & cellular proteomics : MCP 2002 Williams KE, Carver TA, Miranda JJ, Kautiainen A, Vogel JS, Dingley K, Baldwin MA, Turteltaub KW, Burlingame AL
• Histone acetylation and deacetylation: identification of acetylation and methylation sites of HeLa histone H4 by mass spectrometry.
  Molecular & cellular proteomics : MCP 2002 Zhang K, Williams KE, Huang L, Yau P, Siino JS, Bradbury EM, Jones PR, Minch MJ, Burlingame AL
• Analysis of differential protein expression in normal and neoplastic human breast epithelial cell lines.
  Electrophoresis 1998 Williams K, Chubb C, Huberman E, Giometti CS
• A two-dimensional electrophoresis database of human breast epithelial cell proteins.
  Electrophoresis 1997 Giometti CS, Williams K, Tollaksen SL
• Analysis of proteins from human breast epithelial cells using two-dimensional gel electrophoresis.
  Electrophoresis 1995 Giometti CS, Tollaksen SL, Chubb C, Williams C, Huberman E