Julia Ye, MD, PhD
Resident
Pathology
School of Medicine

Education & Training

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• Fellowship Breast Pathology UCSF 2024
• Residency Anatomic Pathology and Laboratory Medicine UCSF 2023
• M.D., Ph.D. Medicine, Biomedical Sciences UCSF 2019
• A.B. Molecular and Cellular Biology, Germanic Languages and Literatures Harvard College 2010

Grants and Projects

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• Role of interleukin enhancer-binding factor 2 (Ilf2) in mouse embryonic stem cells, NIH, 2015-2018

Publications (11)

Top publication keywords:
Struma OvariiLupus Erythematosus, SystemicTumor Suppressor ProteinsNuclear Factor 45 ProteinNuclear Factor 90 ProteinsEmbryonic Stem CellsGlomerulonephritis, MembranousMelanomaPluripotent Stem CellsLupus NephritisSkin NeoplasmsCiliaUbiquitin ThiolesteraseCentrosomeRNA-Binding Proteins

• The miR-290 and miR-302 clusters are essential for reprogramming of fibroblasts to induced pluripotent stem cells.
  bioRxiv : the preprint server for biology 2024 Ye J, Boileau RM, Parchem RJ, Judson-Torres RL, Blelloch R
• Targeted DNA sequencing in diagnosis of malignant phyllodes tumors with emphasis on tumors with keratin and p63 expression.
  Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc 2024 Ye J, Theparee T, Bean GR, Rutland CD, Schwartz CJ, Vohra P, Allard G, Wang A, Hosfield EM, Peng Y, Chen YY, Krings G
• Performance of MYC, BCL2, and BCL6 break-apart FISH in small biopsies with large B-cell lymphoma: a retrospective Cytopathology Hematopathology Interinstitutional Consortium study.
  Frontiers in oncology 2024 Menke JR, Aypar U, Bangs CD, Cook SL, Gupta S, Hasserjian RP, Kong CS, Lin O, Long SR, Ly A, Menke JAS, Natkunam Y, Ruiz-Cordero R, Spiteri E, Ye J, Zadeh SL, Gratzinger DA
• Non-Full House Membranous Lupus Nephritis Represents a Clinically Distinct Subset.
  Kidney360 2023 Ye J, Croom N, Troxell ML, Kambham N, Zuckerman JE, Andeen N, Dall'Era M, Hsu R, Walavalkar V, Laszik ZG, Urisman A
• Diagnosis of acute mesenteric ischemia assisted by dual-energy CT: a case report.
  Emergency radiology 2022 Chen JV, Ohliger MA, Chung M, Sugi MD, Ye J, Nishimura SL, Choi HH

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• Boba sign with a twist - A variant presentation of a mature cystic teratoma complicated by torsion and rupture.
  Clinical imaging 2021 Ye AQ, Reyes MF, Lester F, Ye J, Umetsu S, Poder L, Shum DJ, Choi HH
• BAP1-inactivated melanocytic tumors show prominent centrosome amplification and associated loss of primary cilia.
  Journal of cutaneous pathology 2021 Ye J, Sheahon KM, LeBoit PE, McCalmont TH, Lang UE
• NF45 and NF90/NF110 coordinately regulate ESC pluripotency and differentiation.
  RNA (New York, N.Y.) 2017 Ye J, Jin H, Pankov A, Song JS, Blelloch R
• Reduction of aberrant NF-κB signalling ameliorates Rett syndrome phenotypes in Mecp2-null mice.
  Nature communications 2016 Kishi N, MacDonald JL, Ye J, Molyneaux BJ, Azim E, Macklis JD
• Regulation of pluripotency by RNA binding proteins.
  Cell stem cell 2014 Ye J, Blelloch R
• Two miRNA clusters reveal alternative paths in late-stage reprogramming.
  Cell stem cell 2014 Parchem RJ, Ye J, Judson RL, LaRussa MF, Krishnakumar R, Blelloch A, Oldham MC, Blelloch R