Jennifer Chen, MD
Associate Professor
Medicine
School of Medicine
Hepatic fibrogenesis is the molecular process that leads to end-stage liver disease, and there are currently no FDA-approved therapies that target this process. During my clinical training in internal medicine and hepatology, I was struck by the lack of therapies available for my patients with chronic liver disease and by how the vast majority were unaware of their diagnosis of hepatic fibrosis.
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As a physician-scientist trained in hepatology, my research program is focused on developing a precision approach for the diagnosis and treatment of hepatic fibrogenesis to improve the care of my patients with chronic liver disease.
We previously performed a small molecule screen to identify mechanisms that inactivate hepatic stellate cells (HSCs), the primary cell type responsible for hepatic fibrosis. We identified several targets, including the enzyme acid ceramidase (aCDase). Our studies uncovered a novel signaling network through which aCDase inhibition regulates phosphorylation and degradation of YAP/TAZ, key effectors of the Hippo signaling pathway. We validated aCDase as an antifibrotic target using conditional genetic knockout and pharmacologic approaches, and demonstrated that targeting aCDase inhibits YAP/TAZ activity, decreases matrix stiffness, and reduces fibrosis development and promotes fibrosis regression using multiple mouse models of fibrosis. Our data also show that aCDase inhibition reduces fibrogenesis in fibrotic rat and human liver tissues ex vivo. We also developed a gene signature score, the ceramide responsiveness score, which is significantly increased in NASH patients with advanced fibrosis.
Current projects in our research laboratory include identification of the upstream and downstream targets of the acid ceramidase-YAP/TAZ pathway; the development of novel aCDase inhibitors in partnership with medicinal chemists William DeGrado and Hyunil Jo for the treatment of hepatic fibrosis and hepatocellular carcinoma; and the refinement and validation of gene signature scores as biomarkers for hepatic fibrogenesis. We are also pursuing additional novel antifibrotic targets.
Education & Training
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- Fellowship in Gastroenterology and Hepatology Massachusetts General Hospital 06/2016
- Residency in Internal Medicine Brigham and Women's Hospital 06/2012
- MD Doctor of Medicine Harvard Medical School 06/2009
- AB Government Harvard College 06/2003
Websites
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- The website of the Jennifer Chen laboratory at UCSF (Chenlab.ucsf.edu)
Grants and Projects
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- Targeting Acid Ceramidase for Hepatic Fibrogenesis, NIDDK, 2023-2028
- Dissecting the Acid Ceramidase Pathway in Hepatic Fibrogenesis, NIH, 2023-2028
- Targeting Acid Ceramidase to Reverse NASH FIbrosis, Harrington Discovery Institute, 2021-2023
- Role of Ceramide in Hepatic Stellate Cell Activation and Liver Fibrosis, NIH, 2017-2023
- Precision Gene Signatures for NASH Fibrogenesis, Merck SEEDS Program, 2021-2022
- Targeting Acid Ceramidase for the Treatment of NASH and HCC, , 2020-2022
- Dissecting the Role of YAP and TAZ in Hepatic Stellate Activation and Liver Fibrosis, NIH, 2018-2019
- Tricyclic Antidepressants Induce Hepatic Stellate Cell Quiescence: Identification of Mechanisms to Halt Hepatic Fibrosis, NIH, 2015-2016
Publications (20)
Top publication keywords:
Hepatitis C, ChronicPregnancy Complications, InfectiousBotswanaStillbirthAntiviral AgentsAcid CeramidaseAntiretroviral Therapy, Highly ActiveHIV InfectionsHepacivirusAntidepressive Agents, TricyclicCollagenCoinfectionCeramidesLiver CirrhosisHepatic Stellate Cells
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Targeting acid ceramidase ameliorates fibrosis in mouse models of non-alcoholic steatohepatitis.
Frontiers in medicine 2022 Yu A, Cable C, Sharma S, Shihan MH, Mattis AN, Mileva I, Hannun YA, Duwaerts CC, Chen JY -
Nanchangmycin regulates FYN, PTK2, and MAPK1/3 to control the fibrotic activity of human hepatic stellate cells.
eLife 2022 Li W, Chen JY, Sun C, Sparks RP, Pantano L, Rahman RU, Moran SP, Pondick JV, Kirchner R, Wrobel D, Bieler M, Sauer A, Ho Sui SJ, Doerner JF, Rippmann JF, Mullen AC -
Targeting acid ceramidase inhibits YAP/TAZ signaling to reduce fibrosis in mice.
Science translational medicine 2020 Alsamman S, Christenson SA, Yu A, Ayad NME, Mooring MS, Segal JM, Hu JK, Schaub JR, Ho SS, Rao V, Marlow MM, Turner SM, Sedki M, Pantano L, Ghoshal S, Ferreira DDS, Ma HY, Duwaerts CC, Espanol-Suner R… -
Tricyclic antidepressant use and the risk of fibrosis progression in hepatitis C-infected persons: Results from ERCHIVES.
Journal of viral hepatitis 2018 Chen JY, Ren Y, Yan P, Belina ME, Chung RT, Butt AA -
Tricyclic Antidepressants Promote Ceramide Accumulation to Regulate Collagen Production in Human Hepatic Stellate Cells.
Scientific reports 2017 Chen JY, Newcomb B, Zhou C, Pondick JV, Ghoshal S, York SR, Motola DL, Coant N, Yi JK, Mao C, Tanabe KK, Bronova I, Berdyshev EV, Fuchs BC, Hannun Y, Chung RT, Mullen AC -
Long noncoding RNAs expressed in human hepatic stellate cells form networks with extracellular matrix proteins.
Genome medicine 2016 Zhou C, York SR, Chen JY, Pondick JV, Motola DL, Chung RT, Mullen AC
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Controlled fabrication of functional liver spheroids with microfluidic flow cytometric printing.
Biofabrication 2022 Zhang P, Li X, Chen JY, Abate AR -
Emulating a target trial of antiretroviral therapy regimens started before conception and risk of adverse birth outcomes.
AIDS (London, England) 2018 Caniglia EC, Zash R, Jacobson DL, Diseko M, Mayondi G, Lockman S, Chen JY, Mmalane M, Makhema J, Hernán MA, Shapiro RL -
Reassuring Birth Outcomes With Tenofovir/Emtricitabine/Efavirenz Used for Prevention of Mother-to-Child Transmission of HIV in Botswana.
Journal of acquired immune deficiency syndromes (1999) 2016 Zash R, Souda S, Chen JY, Binda K, Dryden-Peterson S, Lockman S, Mmalane M, Makhema J, Essex M, Shapiro R -
Initial programmatic implementation of WHO option B in Botswana associated with increased projected MTCT.
Journal of acquired immune deficiency syndromes (1999) 2015 Dryden-Peterson S, Lockman S, Zash R, Lei Q, Chen JY, Souda S, Petlo C, Dintwa E, Lebelonyane R, Mmalane M, Shapiro RL -
Noncommunicable diseases in HIV infection in low- and middle-income countries: gastrointestinal, hepatic, and nutritional aspects.
Journal of acquired immune deficiency syndromes (1999) 2014 Kelly P, Saloojee H, Chen JY, Chung RT -
HCV and HIV co-infection: mechanisms and management.
Nature reviews. Gastroenterology & hepatology 2014 Chen JY, Feeney ER, Chung RT -
Future classes of hepatitis C virus therapeutic agents.
Infectious disease clinics of North America 2012 Chen JY, Chung RT -
Highly active antiretroviral therapy and adverse birth outcomes among HIV-infected women in Botswana.
The Journal of infectious diseases 2012 Chen JY, Ribaudo HJ, Souda S, Parekh N, Ogwu A, Lockman S, Powis K, Dryden-Peterson S, Creek T, Jimbo W, Madidimalo T, Makhema J, Essex M, Shapiro RL -
Extended therapy with pegylated interferon and weight-based ribavirin for HCV-HIV coinfected patients.
HIV clinical trials 2012 Chung RT, Umbleja T, Chen JY, Andersen JW, Butt AA, Sherman KE, Actg A5178 Study Team -
Birth weight for gestational age norms for a large cohort of infants born to HIV-negative women in Botswana compared with norms for U.S.-born black infants.
BMC pediatrics 2011 Matthews LT, Ribaudo HJ, Parekh NK, Chen JY, Binda K, Ogwu A, Makhema J, Souda S, Lockman S, Essex M, Shapiro RL -
Engaging HIV-infected patients in antiretroviral therapy services: CD4 cell count testing after HIV diagnosis from 2005 to 2009 in Yunnan and Guangxi, China.
Chinese medical journal 2011 Zhang Y, Lu L, Li HQ, Liu W, Tang ZR, Fang H, Chen JY, Ma Y, Zhao Y, Chen RY, Zhang FJ -
Can we use the "C" word with confidence? Cure for chronic hepatitis C.
Gastroenterology 2011 Chen JY, Chung RT -
Antiretroviral treatment initiation among HIV-infected pregnant women with low CD4(+) cell counts in Gaborone, Botswana.
Journal of acquired immune deficiency syndromes (1999) 2010 Chen JY, Ogwu AC, Svab P, Lockman S, Moffat HJ, Gaolathe T, Moilwa S, Størdal K, Dryden-Peterson S, Moffat C, Makhema J, Essex M, Shapiro RL -
Monitoring the implementation of Consultation Planning, Recording, and Summarizing in a breast care center.
Patient education and counseling 2008 Belkora JK, Loth MK, Chen DF, Chen JY, Volz S, Esserman LJ