Isabel Rodriguez-Barraquer, MD, PhD, MHS
Associate Professor
Medicine
School of Medicine

My research focuses in applying novel epidemiological and statistical methods to understand the dynamics of infectious diseases and inform control interventions. While I am interested in infectious diseases generally, most of my work has focused on understanding shifts in the epidemiology of vector borne diseases including dengue, leishmaniasis, chikungunya, malaria and Zika.

Education & Training

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• Diversity, Equity, and Inclusion Champion Training University of California 2019
• MHS Biostatistics Johns Hopkins University 08/2012
• PhD Epidemiology Johns Hopkins University 08/2012
• MD Medicine Pontificia Universidad Javeriana 06/2005

Interests

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• dengue
• Transmission dynamics
• Epidemiology
• vector-borne diseases
• malaria
• serology
• Zika

Websites

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• @@isabelrodbar on Twitter (twitter.com)
• Global dengue transmission map (mrcdata.dide.ic.ac.uk)

Grants and Projects

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• Uncovering the dynamics of human pathogens using high throughput multiplexed serological tools, NIH, 2020-2025

Publications (116)

Top publication keywords:
Mosquito VectorsInsecticidesPlasmodium falciparumDengueSeroepidemiologic StudiesMosquito ControlUgandaMalariaEpidemiological MonitoringDengue VaccinesAnophelesDengue VirusZika Virus InfectionMalaria, FalciparumAntibodies, Viral

• Quantification of anti-parasite and anti-disease immunity to malaria as a function of age and exposure.
  eLife 2018 Rodriguez-Barraquer I, Arinaitwe E, Jagannathan P, Kamya MR, Rosenthal PJ, Rek J, Dorsey G, Nankabirwa J, Staedke SG, Kilama M, Drakeley C, Ssewanyana I, Smith DL, Greenhouse B
• Dramatic resurgence of malaria after 7 years of intensive vector control interventions in Eastern Uganda.
  medRxiv : the preprint server for health sciences 2024 Kamya MR, Nankabirwa JI, Arinaitwe E, Rek J, Zedi M, Maiteki-Sebuguzi C, Opigo J, Staedke SG, Oruni A, Donnelly MJ, Greenhouse B, Briggs J, Krezanoski PJ, Bousema T, Rosenthal PJ, Olwoch P, …
• Household immunity and individual risk of infection with dengue virus in a prospective, longitudinal cohort study.
  Nature microbiology 2023 Hamins-Puértolas M, Buddhari D, Salje H, Cummings DAT, Fernandez S, Farmer A, Kaewhiran S, Khampaen D, Iamsirithaworn S, Srikiatkhachorn A, Waickman A, Thomas SJ, Rothman AL, Endy T, Rodriguez-…
• Maternally derived antibody titer dynamics and risk of hospitalized infant dengue disease.
  Proceedings of the National Academy of Sciences of the United States of America 2023 O'Driscoll M, Buddhari D, Huang AT, Waickman A, Kaewhirun S, Iamsirithaworn S, Khampaen D, Farmer A, Fernandez S, Rodriguez-Barraquer I, Srikiatkhachorn A, Thomas S, Endy T, Rothman AL, Anderson K, …
• SARS-CoV-2 Serology Across Scales: A Framework for Unbiased Estimation of Cumulative Incidence Incorporating Antibody Kinetics and Epidemic Recency.
  American journal of epidemiology 2023 Takahashi S, Peluso MJ, Hakim J, Turcios K, Janson O, Routledge I, Busch MP, Hoh R, Tai V, Kelly JD, Martin JN, Deeks SG, Henrich TJ, Greenhouse B, Rodríguez-Barraquer I

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• Metagenomic next-generation sequencing to characterize potential etiologies of non-malarial fever in a cohort living in a high malaria burden area of Uganda.
  PLOS global public health 2023 Mwakibete L, Takahashi S, Ahyong V, Black A, Rek J, Ssewanyana I, Kamya M, Dorsey G, Jagannathan P, Rodríguez-Barraquer I, Tato CM, Greenhouse B
• Mapping malaria incidence using routine health facility surveillance data in Uganda.
  BMJ global health 2023 Epstein A, Namuganga JF, Nabende I, Kamya EV, Kamya MR, Dorsey G, Sturrock H, Bhatt S, Rodríguez-Barraquer I, Greenhouse B
• Antibodies to repeat-containing antigens in Plasmodium falciparum are exposure-dependent and short-lived in children in natural malaria infections.
  eLife 2023 Raghavan M, Kalantar KL, Duarte E, Teyssier N, Takahashi S, Kung AF, Rajan JV, Rek J, Tetteh KKA, Drakeley C, Ssewanyana I, Rodriguez-Barraquer I, Greenhouse B, DeRisi JL
• Malaria-driven expansion of adaptive-like functional CD56-negative NK cells correlates with clinical immunity to malaria.
  Science translational medicine 2023 Ty M, Sun S, Callaway PC, Rek J, Press KD, van der Ploeg K, Nideffer J, Hu Z, Klemm S, Greenleaf W, Donato M, Tukwasibwe S, Arinaitwe E, Nankya F, Musinguzi K, Andrew D, de la Parte L, Mori DM, Lewis …
• Infectiousness of SARS-CoV-2 breakthrough infections and reinfections during the Omicron wave.
  Nature medicine 2023 Tan ST, Kwan AT, Rodríguez-Barraquer I, Singer BJ, Park HJ, Lewnard JA, Sears D, Lo NC
• Early immune markers of clinical, virological, and immunological outcomes in patients with COVID-19: a multi-omics study.
  eLife 2022 Hu Z, van der Ploeg K, Chakraborty S, Arunachalam PS, Mori DAM, Jacobson KB, Bonilla H, Parsonnet J, Andrews JR, Holubar M, Subramanian A, Khosla C, Maldonado Y, Hedlin H, de la Parte L, Press K, Ty M…
• East Africa International Center of Excellence for Malaria Research: Summary of Key Research Findings.
  The American journal of tropical medicine and hygiene 2022 Nankabirwa JI, Rek J, Arinaitwe E, Namuganga JF, Nsobya SL, Asua V, Mawejje HD, Epstein A, Greenhouse B, Rodriguez-Barraquer I, Briggs J, Krezanoski PJ, Rosenthal PJ, Conrad M, Smith D, Staedke SG, …
• Building an integrated serosurveillance platform to inform public health interventions: Insights from an experts' meeting on serum biomarkers.
  PLoS neglected tropical diseases 2022 Wiens KE, Jauregui B, Arnold BF, Banke K, Wade D, Hayford K, Costero-Saint Denis A, Hall RH, Salje H, Rodriguez-Barraquer I, Azman AS, Vernet G, Leung DT, Collaboration on Integrated Biomarkers …
• Simulating the Impacts of Augmenting Intensive Vector Control with Mass Drug Administration or Test-and-Treat Strategies on the Malaria Infectious Reservoir.
  The American journal of tropical medicine and hygiene 2022 Nankabirwa JI, Arinaitwe E, Briggs J, Rek J, Rosenthal PJ, Kamya MR, Olwoch P, Smith DL, Rodriguez-Barraquer I, Dorsey G, Greenhouse B
• Dcifer: an IBD-based method to calculate genetic distance between polyclonal infections.
  Genetics 2022 Gerlovina I, Gerlovin B, Rodríguez-Barraquer I, Greenhouse B
• Resurgence of malaria in Uganda despite sustained indoor residual spraying and repeated long lasting insecticidal net distributions.
  PLOS Global Public Health 2022 Adrienne Epstein, Catherine Maiteki-Sebuguzi, Jane F. Namuganga, Joaniter I. Nankabirwa, Samuel Gonahasa, Jimmy Opigo, Sarah G. Staedke, Damian Rutazaana, Emmanuel Arinaitwe, Moses R. Kamya, Samir …
• Resurgence of malaria in Uganda despite sustained indoor residual spraying and repeated long lasting insecticidal net distributions.
  PLOS global public health 2022 Epstein A, Maiteki-Sebuguzi C, Namuganga JF, Nankabirwa JI, Gonahasa S, Opigo J, Staedke SG, Rutazaana D, Arinaitwe E, Kamya MR, Bhatt S, Rodríguez-Barraquer I, Greenhouse B, Donnelly MJ, Dorsey G
• Genetic variation that determines TAPBP expression levels associates with the course of malaria in an HLA allotype-dependent manner.
  Proceedings of the National Academy of Sciences of the United States of America 2022 Walker-Sperling V, Digitale JC, Viard M, Martin MP, Bashirova A, Yuki Y, Ramsuran V, Kulkarni S, Naranbhai V, Li H, Anderson SK, Yum L, Clifford R, Kibuuka H, Ake J, Thomas R, Rowland-Jones S, Rek J, …
• Assessing the role of multiple mechanisms increasing the age of dengue cases in Thailand.
  Proceedings of the National Academy of Sciences of the United States of America 2022 Huang AT, Takahashi S, Salje H, Wang L, Garcia-Carreras B, Anderson K, Endy T, Thomas S, Rothman AL, Klungthong C, Jones AR, Fernandez S, Iamsirithaworn S, Doung-Ngern P, Rodriguez-Barraquer I, …
• Using sero-epidemiology to monitor disparities in vaccination and infection with SARS-CoV-2.
  Nature communications 2022 Routledge I, Takahashi S, Epstein A, Hakim J, Janson O, Turcios K, Vinden J, Risos JT, Baniqued MR, Pham L, Di Germanio C, Busch M, Kushel M, Greenhouse B, Rodríguez-Barraquer I
• TNF-α+ CD4+ T cells dominate the SARS-CoV-2 specific T cell response in COVID-19 outpatients and are associated with durable antibodies.
  Cell reports. Medicine 2022 van der Ploeg K, Kirosingh AS, Mori DAM, Chakraborty S, Hu Z, Sievers BL, Jacobson KB, Bonilla H, Parsonnet J, Andrews JR, Press KD, Ty MC, Ruiz-Betancourt DR, de la Parte L, Tan GS, Blish CA, …
• Beneath the surface: Amino acid variation underlying two decades of dengue virus antigenic dynamics in Bangkok, Thailand.
  PLoS pathogens 2022 Huang AT, Salje H, Escoto AC, Chowdhury N, Chávez C, Garcia-Carreras B, Rutvisuttinunt W, Maljkovic Berry I, Gromowski GD, Wang L, Klungthong C, Thaisomboonsuk B, Nisalak A, Trimmer-Smith LM, …
• COVID-19 Vaccination and Estimated Public Health Impact in California.
  JAMA network open 2022 Tan ST, Park HJ, Rodríguez-Barraquer I, Rutherford GW, Bibbins-Domingo K, Schechter R, Lo NC
• Risk factor targeting for vaccine prioritization during the COVID-19 pandemic.
  Scientific reports 2022 Chapman LAC, Shukla P, Rodríguez-Barraquer I, Shete PB, León TM, Bibbins-Domingo K, Rutherford GW, Schechter R, Lo NC
• Seroprevalence of anti-SARS-CoV-2 antibodies in Colombia, 2020: A population-based study.
  Lancet regional health. Americas 2022 Mercado-Reyes M, Malagón-Rojas J, Rodríguez-Barraquer I, Zapata-Bedoya S, Wiesner M, Cucunubá Z, Toloza-Pérez YG, Hernández-Ortiz JP, Acosta-Reyes J, Parra-Barrera E, Ibáñez-Beltrán E, Quinche GG, …
• Early immune responses have long-term associations with clinical, virologic, and immunologic outcomes in patients with COVID-19.
  Research square 2022 Hu Z, van der Ploeg K, Chakraborty S, Arunachalam P, Mori D, Jacobson K, Bonilla H, Parsonnet J, Andrews J, Hedlin H, de la Parte L, Dantzler K, Ty M, Tan G, Blish C, Takahashi S, Rodriguez-Barraquer …
• Persistence, Magnitude, and Patterns of Postacute Symptoms and Quality of Life Following Onset of SARS-CoV-2 Infection: Cohort Description and Approaches for Measurement.
  Open forum infectious diseases 2021 Peluso MJ, Kelly JD, Lu S, Goldberg SA, Davidson MC, Mathur S, Durstenfeld MS, Spinelli MA, Hoh R, Tai V, Fehrman EA, Torres L, Hernandez Y, Williams MC, Arreguin MI, Ngo LH, Deswal M, Munter SE, …
• Age-Related Changes in Malaria Clinical Phenotypes During Infancy Are Modified by Sickle Cell Trait.
  Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2021 Zehner N, Adrama H, Kakuru A, Andra T, Kajubi R, Conrad M, Nankya F, Clark TD, Kamya M, Rodriguez-Barraquer I, Dorsey G, Jagannathan P
• Using sero-epidemiology to monitor disparities in vaccination and infection with SARS-CoV-2.
  medRxiv : the preprint server for health sciences 2021 Routledge I, Takahashi S, Epstein A, Hakim J, Janson O, Turcios K, Vinden J, Risos JT, Baniqued MR, Pham L, Di Germanio C, Busch M, Kushel M, Greenhouse B, Rodríguez-Barraquer I
• SARS-CoV-2 serology across scales: a framework for unbiased seroprevalence estimation incorporating antibody kinetics and epidemic recency.
  medRxiv : the preprint server for health sciences 2021 Takahashi S, Peluso MJ, Hakim J, Turcios K, Janson O, Routledge I, Busch MP, Hoh R, Tai V, Kelly JD, Martin JN, Deeks SG, Henrich TJ, Greenhouse B, Rodríguez-Barraquer I
• Trade-offs between individual and ensemble forecasts of an emerging infectious disease.
  Nature communications 2021 Oidtman RJ, Omodei E, Kraemer MUG, Castañeda-Orjuela CA, Cruz-Rivera E, Misnaza-Castrillón S, Cifuentes MP, Rincon LE, Cañon V, Alarcon P, España G, Huber JH, Hill SC, Barker CM, Johansson MA, Manore …
• Long-term SARS-CoV-2-specific immune and inflammatory responses in individuals recovering from COVID-19 with and without post-acute symptoms.
  Cell reports 2021 Peluso MJ, Deitchman AN, Torres L, Iyer NS, Munter SE, Nixon CC, Donatelli J, Thanh C, Takahashi S, Hakim J, Turcios K, Janson O, Hoh R, Tai V, Hernandez Y, Fehrman EA, Spinelli MA, Gandhi M, Trinh L,…
• SARS-CoV-2 antibody magnitude and detectability are driven by disease severity, timing, and assay.
  Science advances 2021 Peluso MJ, Takahashi S, Hakim J, Kelly JD, Torres L, Iyer NS, Turcios K, Janson O, Munter SE, Thanh C, Donatelli J, Nixon CC, Hoh R, Tai V, Fehrman EA, Hernandez Y, Spinelli MA, Gandhi M, Palafox MA, …
• Association of Inhibitory Killer Cell Immunoglobulin-like Receptor Ligands With Higher Plasmodium falciparum Parasite Prevalence.
  The Journal of infectious diseases 2021 Digitale JC, Callaway PC, Martin M, Nelson G, Viard M, Rek J, Arinaitwe E, Dorsey G, Kamya M, Carrington M, Rodriguez-Barraquer I, Feeney ME
• Evaluation of the extended efficacy of the Dengvaxia vaccine against symptomatic and subclinical dengue infection.
  Nature medicine 2021 Salje H, Alera MT, Chua MN, Hunsawong T, Ellison D, Srikiatkhachorn A, Jarman RG, Gromowski GD, Rodriguez-Barraquer I, Cauchemez S, Cummings DAT, Macareo L, Yoon IK, Fernandez S, Rothman AL
• Sources of persistent malaria transmission in a setting with effective malaria control in eastern Uganda: a longitudinal, observational cohort study.
  The Lancet. Infectious diseases 2021 Andolina C, Rek JC, Briggs J, Okoth J, Musiime A, Ramjith J, Teyssier N, Conrad M, Nankabirwa JI, Lanke K, Rodriguez-Barraquer I, Meerstein-Kessel L, Arinaitwe E, Olwoch P, Rosenthal PJ, Kamya MR, …
• Citywide serosurveillance of the initial SARS-CoV-2 outbreak in San Francisco using electronic health records.
  Nature communications 2021 Routledge I, Epstein A, Takahashi S, Janson O, Hakim J, Duarte E, Turcios K, Vinden J, Sujishi K, Rangel J, Coh M, Besana L, Ho WK, Oon CY, Ong CM, Yun C, Lynch K, Wu AHB, Wu W, Karlon W, Thornborrow …
• The impact of stopping and starting indoor residual spraying on malaria burden in Uganda.
  Nature communications 2021 Namuganga JF, Epstein A, Nankabirwa JI, Mpimbaza A, Kiggundu M, Sserwanga A, Kapisi J, Arinaitwe E, Gonahasa S, Opigo J, Ebong C, Staedke SG, Shililu J, Okia M, Rutazaana D, Maiteki-Sebuguzi C, Belay …
• Comparison of infection control strategies to reduce COVID-19 outbreaks in homeless shelters in the United States: a simulation study.
  BMC medicine 2021 Chapman LAC, Kushel M, Cox SN, Scarborough A, Cawley C, Nguyen TQ, Rodriguez-Barraquer I, Greenhouse B, Imbert E, Lo NC
• Routine asymptomatic testing strategies for airline travel during the COVID-19 pandemic: a simulation study.
  The Lancet. Infectious diseases 2021 Kiang MV, Chin ET, Huynh BQ, Chapman LAC, Rodríguez-Barraquer I, Greenhouse B, Rutherford GW, Bibbins-Domingo K, Havlir D, Basu S, Lo NC
• HLA Alleles B*53:01 and C*06:02 Are Associated With Higher Risk of P. falciparum Parasitemia in a Cohort in Uganda.
  Frontiers in immunology 2021 Digitale JC, Callaway PC, Martin M, Nelson G, Viard M, Rek J, Arinaitwe E, Dorsey G, Kamya M, Carrington M, Rodriguez-Barraquer I, Feeney ME
• Rapid implementation of a cohort for the study of post-acute sequelae of SARS-CoV-2 infection/COVID-19.
  medRxiv : the preprint server for health sciences 2021 Peluso MJ, Kelly JD, Lu S, Goldberg SA, Davidson MC, Mathur S, Durstenfeld MS, Spinelli MA, Hoh R, Tai V, Fehrman EA, Torres L, Hernandez Y, Williams MC, Arreguin MI, Bautista JA, Ngo LH, Deswal M, …
• SARS-CoV-2 antibody magnitude and detectability are driven by disease severity, timing, and assay.
  medRxiv : the preprint server for health sciences 2021 Peluso MJ, Takahashi S, Hakim J, Kelly JD, Torres L, Iyer NS, Turcios K, Janson O, Munter SE, Thanh C, Nixon CC, Hoh R, Tai V, Fehrman EA, Hernandez Y, Spinelli MA, Gandhi M, Palafox MA, Vallari A, …
• Long-Term SARS-CoV-2-Specific Immune and Inflammatory Responses Across a Clinically Diverse Cohort of Individuals Recovering from COVID-19.
  medRxiv : the preprint server for health sciences 2021 Peluso MJ, Deitchman AN, Torres L, Iyer NS, Nixon CC, Munter SE, Donatelli J, Thanh C, Takahashi S, Hakim J, Turcios K, Janson O, Hoh R, Tai V, Hernandez Y, Fehrman E, Spinelli MA, Gandhi M, Trinh L, …
• Characterization and Biomarker Analyses of Post-COVID-19 Complications and Neurological Manifestations.
  Cells 2021 Sun B, Tang N, Peluso MJ, Iyer NS, Torres L, Donatelli JL, Munter SE, Nixon CC, Rutishauser RL, Rodriguez-Barraquer I, Greenhouse B, Kelly JD, Martin JN, Deeks SG, Henrich TJ, Pulliam L
• Citywide serosurveillance of the initial SARS-CoV-2 outbreak in San Francisco.
  Research square 2021 Routledge I, Epstein A, Takahashi S, Janson O, Hakim J, Duarte E, Turcios K, Vinden J, Sujishi K, Rangel J, Coh M, Besana L, Ho WK, Oon CY, Ong CM, Yun C, Lynch K, Wu AHB, Wu W, Karlon W, Thornborrow …
• Within-household clustering of genetically related Plasmodium falciparum infections in a moderate transmission area of Uganda.
  Malaria journal 2021 Briggs J, Kuchta A, Murphy M, Tessema S, Arinaitwe E, Rek J, Chen A, Nankabirwa JI, Drakeley C, Smith D, Bousema T, Kamya M, Rodriguez-Barraquer I, Staedke S, Dorsey G, Rosenthal PJ, Greenhouse B
• Influenza, Varicella, and Mumps Outbreaks in US Migrant Detention Centers.
  JAMA 2021 Lo NC, Nyathi S, Chapman LAC, Rodriguez-Barraquer I, Kushel M, Bibbins-Domingo K, Lewnard JA
• Routine asymptomatic testing strategies for airline travel during the COVID-19 pandemic: a simulation analysis.
  medRxiv : the preprint server for health sciences 2020 Kiang MV, Chin ET, Huynh BQ, Chapman LAC, Rodríguez-Barraquer I, Greenhouse B, Rutherford GW, Bibbins-Domingo K, Havlir D, Basu S, Lo NC
• Estimating malaria incidence from routine health facility-based surveillance data in Uganda.
  Malaria journal 2020 Epstein A, Namuganga JF, Kamya EV, Nankabirwa JI, Bhatt S, Rodriguez-Barraquer I, Staedke SG, Kamya MR, Dorsey G, Greenhouse B
• Are Seroprevalence Estimates for Severe Acute Respiratory Syndrome Coronavirus 2 Biased?
  The Journal of infectious diseases 2020 Takahashi S, Greenhouse B, Rodríguez-Barraquer I
• Universal PCR and antibody testing demonstrate little to no transmission of SARS-CoV-2 in a rural community.
  Open Forum Infectious Diseases 2020 Ayesha Appa, Saki Takahashi, Isabel Rodriguez-Barraquer, Gabriel Chamie, Aenor Sawyer, Elias Duarte, Jill Hakim, Keirstinne Turcios, Joanna Vinden, Owen Janson, Aashish Manglik, Michael J Peluso, …
• Universal Polymerase Chain Reaction and Antibody Testing Demonstrate Little to No Transmission of Severe Acute Respiratory Syndrome Coronavirus 2 in a Rural Community.
  Open forum infectious diseases 2020 Appa A, Takahashi S, Rodriguez-Barraquer I, Chamie G, Sawyer A, Duarte E, Hakim J, Turcios K, Vinden J, Janson O, Manglik A, Peluso MJ, Deeks SG, Henrich TJ, Torres L, Rodgers M, Hackett J, Chiu C, …
• Sex-based differences in clearance of chronic Plasmodium falciparum infection.
  eLife 2020 Briggs J, Teyssier N, Nankabirwa JI, Rek J, Jagannathan P, Arinaitwe E, Bousema T, Drakeley C, Murray M, Crawford E, Hathaway N, Staedke SG, Smith D, Rosenthal PJ, Kamya M, Dorsey G, Rodriguez-…
• Malaria Transmission, Infection, and Disease following Sustained Indoor Residual Spraying of Insecticide in Tororo, Uganda.
  The American journal of tropical medicine and hygiene 2020 Nankabirwa JI, Arinaitwe E, Rek J, Kilama M, Kizza T, Staedke SG, Rosenthal PJ, Rodriguez-Barraquer I, Briggs J, Greenhouse B, Bousema T, Drakeley C, Roos DS, Tomko SS, Smith DL, Kamya MR, Dorsey G
• A systematic review of antibody mediated immunity to coronaviruses: kinetics, correlates of protection, and association with severity.
  Nature communications 2020 Huang AT, Garcia-Carreras B, Hitchings MDT, Yang B, Katzelnick LC, Rattigan SM, Borgert BA, Moreno CA, Solomon BD, Trimmer-Smith L, Etienne V, Rodriguez-Barraquer I, Lessler J, Salje H, Burke DS, …
• Heterogeneity of dengue transmission in an endemic area of Colombia.
  PLoS neglected tropical diseases 2020 Estupiñán Cárdenas MI, Herrera VM, Miranda Montoya MC, Lozano Parra A, Zaraza Moncayo ZM, Flórez García JP, Rodríguez Barraquer I, Villar Centeno LÁ
• Universal PCR and antibody testing demonstrate little to no transmission of SARS-CoV-2 in a rural community.
  medRxiv : the preprint server for health sciences 2020 Appa A, Takahashi S, Rodriguez-Barraquer I, Chamie G, Sawyer A, Consortium C, Duarte E, Hakim J, Turcios K, Vinden J, Janson O, Manglik A, Peluso MJ, Deeks SG, Henrich TJ, Torres L, Rodgers M, Hackett…
• Serology for SARS-CoV-2: Apprehensions, opportunities, and the path forward.
  Science immunology 2020 Bryant JE, Azman AS, Ferrari MJ, Arnold BF, Boni MF, Boum Y, Hayford K, Luquero FJ, Mina MJ, Rodriguez-Barraquer I, Wu JT, Wade D, Vernet G, Leung DT
• The Impact of Control Interventions on Malaria Burden in Young Children in a Historically High-Transmission District of Uganda: A Pooled Analysis of Cohort Studies from 2007 to 2018.
  The American journal of tropical medicine and hygiene 2020 Kamya MR, Kakuru A, Muhindo M, Arinaitwe E, Nankabirwa JI, Rek J, Bigira V, Kapisi J, Wanzira H, Achan J, Natureeba P, Gasasira A, Havlir D, Jagannathan P, Rosenthal PJ, Rodriguez-Barraquer I, Dorsey …
• A systematic review of antibody mediated immunity to coronaviruses: antibody kinetics, correlates of protection, and association of antibody responses with severity of disease.
  medRxiv : the preprint server for health sciences 2020 Huang AT, Garcia-Carreras B, Hitchings MDT, Yang B, Katzelnick LC, Rattigan SM, Borgert BA, Moreno CA, Solomon BD, Rodriguez-Barraquer I, Lessler J, Salje H, Burke D, Wesolowski A, Cummings DAT
• Rapid shifts in the age-specific burden of malaria following successful control interventions in four regions of Uganda.
  Malaria journal 2020 Kigozi SP, Kigozi RN, Epstein A, Mpimbaza A, Sserwanga A, Yeka A, Nankabirwa JI, Halliday K, Pullan RL, Rutazaana D, Sebuguzi CM, Opigo J, Kamya MR, Staedke SG, Dorsey G, Greenhouse B, Rodriguez-…
• Mapping global variation in dengue transmission intensity.
  Science translational medicine 2020 Cattarino L, Rodriguez-Barraquer I, Imai N, Cummings DAT, Ferguson NM
• Associations between red blood cell variants and malaria among children and adults from three areas of Uganda: a prospective cohort study.
  Malaria journal 2020 Kakande E, Greenhouse B, Bajunirwe F, Drakeley C, Nankabirwa JI, Walakira A, Nsobya SL, Katureebe A, Rek J, Arinaitwe E, Rosenthal PJ, Kamya MR, Dorsey G, Rodriguez-Barraquer I
• The Impact of Multiple Rounds of Indoor Residual Spraying on Malaria Incidence and Hemoglobin Levels in a High-Transmission Setting.
  The Journal of infectious diseases 2020 Zinszer K, Charland K, Vahey S, Jahagirdar D, Rek JC, Arinaitwe E, Nankabirwa J, Morrison K, Sadoine ML, Tutt-Guérette MA, Staedke SG, Kamya MR, Greenhouse B, Rodriguez-Barraquer I, Dorsey G
• Impacts of Zika emergence in Latin America on endemic dengue transmission.
  Nature communications 2019 Borchering RK, Huang AT, Mier-Y-Teran-Romero L, Rojas DP, Rodriguez-Barraquer I, Katzelnick LC, Martinez SD, King GD, Cinkovich SC, Lessler J, Cummings DAT
• Pareto rules for malaria super-spreaders and super-spreading.
  Nature communications 2019 Cooper L, Kang SY, Bisanzio D, Maxwell K, Rodriguez-Barraquer I, Greenhouse B, Drakeley C, Arinaitwe E, G Staedke S, Gething PW, Eckhoff P, Reiner RC, Hay SI, Dorsey G, Kamya MR, Lindsay SW, Grenfell …
• Serological inference of past primary and secondary dengue infection: implications for vaccination.
  Journal of the Royal Society, Interface 2019 Lam HM, Phuong HT, Thao Vy NH, Le Thanh NT, Dung PN, Ngoc Muon TT, Van Vinh Chau N, Rodríguez-Barraquer I, Cummings DAT, Wills BA, Boni MF, Rabaa MA, Clapham HE
• Heterogeneous local dynamics revealed by classification analysis of spatially disaggregated time series data.
  Epidemics 2019 Perkins TA, Rodriguez-Barraquer I, Manore C, Siraj AS, España G, Barker CM, Johansson MA, Reiner RC
• Impact of Microscopic and Submicroscopic Parasitemia During Pregnancy on Placental Malaria in a High-Transmission Setting in Uganda.
  The Journal of infectious diseases 2019 Briggs J, Ategeka J, Kajubi R, Ochieng T, Kakuru A, Ssemanda C, Wasswa R, Jagannathan P, Greenhouse B, Rodriguez-Barraquer I, Kamya M, Dorsey G
• Opportunities for improved surveillance and control of dengue from age-specific case data.
  eLife 2019 Rodriguez-Barraquer I, Salje H, Cummings DA
• Nationally-representative serostudy of dengue in Bangladesh allows generalizable disease burden estimates.
  eLife 2019 Salje H, Paul KK, Paul R, Rodriguez-Barraquer I, Rahman Z, Alam MS, Rahman M, Al-Amin HM, Heffelfinger J, Gurley E
• Persistent Parasitemia Despite Dramatic Reduction in Malaria Incidence After 3 Rounds of Indoor Residual Spraying in Tororo, Uganda.
  The Journal of infectious diseases 2019 Nankabirwa JI, Briggs J, Rek J, Arinaitwe E, Nayebare P, Katrak S, Staedke SG, Rosenthal PJ, Rodriguez-Barraquer I, Kamya MR, Dorsey G, Greenhouse B
• Long-term circulation of Zika virus in Thailand: an observational study.
  The Lancet. Infectious diseases 2019 Ruchusatsawat K, Wongjaroen P, Posanacharoen A, Rodriguez-Barraquer I, Sangkitporn S, Cummings DAT, Salje H
• Impact of preexisting dengue immunity on Zika virus emergence in a dengue endemic region.
  Science (New York, N.Y.) 2019 Rodriguez-Barraquer I, Costa F, Nascimento EJM, Nery N, Castanha PMS, Sacramento GA, Cruz J, Carvalho M, De Olivera D, Hagan JE, Adhikarla H, Wunder EA, Coêlho DF, Azar SR, Rossi SL, Vasilakis N, …
• Dengue pre-vaccination screening and positive predictive values.
  The Lancet. Infectious diseases 2019 Rodríguez-Barraquer I, Salje H, Cummings DA
• 645: Revisiting the evidence underlying Zika travel restrictions: quantifying risk for pregnant travelers and their partners.
  American Journal of Obstetrics and Gynecology 2019 Lauren M. Kucirka, Isabel Rodriguez-Barraquer, Jeanne Sheffield, Justin Lessler
• Heterogeneous exposure and hotspots for malaria vectors at three study sites in Uganda.
  Gates open research 2018 Kang SY, Battle KE, Gibson HS, Cooper LV, Maxwell K, Kamya M, Lindsay SW, Dorsey G, Greenhouse B, Rodriguez-Barraquer I, Reiner RCJ, Smith DL, Bisanzio D
• Taking Sharper Pictures of Malaria with CAMERAs: Combined Antibodies to Measure Exposure Recency Assays.
  The American journal of tropical medicine and hygiene 2018 Greenhouse B, Smith DL, Rodríguez-Barraquer I, Mueller I, Drakeley CJ
• Viridot: An automated virus plaque (immunofocus) counter for the measurement of serological neutralizing responses with application to dengue virus.
  PLoS neglected tropical diseases 2018 Katzelnick LC, Coello Escoto A, McElvany BD, Chávez C, Salje H, Luo W, Rodriguez-Barraquer I, Jarman R, Durbin AP, Diehl SA, Smith DJ, Whitehead SS, Cummings DAT
• Dynamics and determinants of the force of infection of dengue virus from 1994 to 2015 in Managua, Nicaragua.
  Proceedings of the National Academy of Sciences of the United States of America 2018 Katzelnick LC, Ben-Shachar R, Mercado JC, Rodriguez-Barraquer I, Elizondo D, Arguello S, Nuñez A, Ojeda S, Sanchez N, Lopez Mercado B, Gresh L, Burger-Calderon R, Kuan G, Gordon A, Balmaseda A, Harris…
• Dihydroartemisinin-piperaquine for intermittent preventive treatment of malaria during pregnancy and risk of malaria in early childhood: A randomized controlled trial.
  PLoS medicine 2018 Jagannathan P, Kakuru A, Okiring J, Muhindo MK, Natureeba P, Nakalembe M, Opira B, Olwoch P, Nankya F, Ssewanyana I, Tetteh K, Drakeley C, Beeson J, Reiling L, Clark TD, Rodriguez-Barraquer I, …
• Reconstruction of antibody dynamics and infection histories to evaluate dengue risk.
  Nature 2018 Salje H, Cummings DAT, Rodriguez-Barraquer I, Katzelnick LC, Lessler J, Klungthong C, Thaisomboonsuk B, Nisalak A, Weg A, Ellison D, Macareo L, Yoon IK, Jarman R, Thomas S, Rothman AL, Endy T, …
• Spatiotemporal incidence of Zika and associated environmental drivers for the 2015-2016 epidemic in Colombia.
  Scientific data 2018 Siraj AS, Rodriguez-Barraquer I, Barker CM, Tejedor-Garavito N, Harding D, Lorton C, Lukacevic D, Oates G, Espana G, Kraemer MUG, Manore C, Johansson MA, Tatem AJ, Reiner RC, Perkins TA
• Heterogeneous exposure and hotspots for malaria vectors at three study sites in Uganda.
  Gates Open Research 2018 Su Yun Kang, Katherine E. Battle, Harry S. Gibson, Laura V. Cooper, Kilama Maxwell, Moses Kamya, Steven W. Lindsay, Grant Dorsey, Bryan Greenhouse, Isabel Rodriguez-Barraquer, Robert C. Jr. Reiner, …
• High Hepatitis E Seroprevalence Among Displaced Persons in South Sudan.
  The American journal of tropical medicine and hygiene 2017 Azman AS, Bouhenia M, Iyer AS, Rumunu J, Laku RL, Wamala JF, Rodriguez-Barraquer I, Lessler J, Gignoux E, Luquero FJ, Leung DT, Gurley ES, Ciglenecki I
• Impact of interventions and the incidence of ebola virus disease in Liberia-implications for future epidemics.
  Health policy and planning 2017 Kirsch TD, Moseson H, Massaquoi M, Nyenswah TG, Goodermote R, Rodriguez-Barraquer I, Lessler J, Cumings DA, Peters DH
• The Long-Term Safety, Public Health Impact, and Cost-Effectiveness of Routine Vaccination with a Recombinant, Live-Attenuated Dengue Vaccine (Dengvaxia): A Model Comparison Study.
  PLoS medicine 2016 Flasche S, Jit M, Rodríguez-Barraquer I, Coudeville L, Recker M, Koelle K, Milne G, Hladish TJ, Perkins TA, Cummings DA, Dorigatti I, Laydon DJ, España G, Kelso J, Longini I, Lourenco J, Pearson CA, …
• Impact of interventions and the incidence of ebola virus disease in Liberia-implications for future epidemics.
  Health policy and planning 2016 Kirsch TD, Moseson H, Massaquoi M, Nyenswah TG, Goodermote R, Rodriguez-Barraquer I, Lessler J, Cumings D, Peters DH
• Benefits and risks of the Sanofi-Pasteur dengue vaccine: Modeling optimal deployment.
  Science (New York, N.Y.) 2016 Ferguson NM, Rodríguez-Barraquer I, Dorigatti I, Mier-Y-Teran-Romero L, Laydon DJ, Cummings DA
• Erratum to: Trends in the Mechanistic and Dynamic Modeling of Infectious Diseases.
  Current Epidemiology Reports 2016 Justin Lessler, Andrew S. Azman, M. Kate Grabowski, Henrik Salje, Isabel Rodriguez-Barraquer
• Trends in the Mechanistic and Dynamic Modeling of Infectious Diseases.
  Current Epidemiology Reports 2016 Justin Lessler, Andrew S. Azman, M. Kate Grabowski, Henrik Salje, Isabel Rodriguez-Barraquer
• Quantifying Heterogeneous Malaria Exposure and Clinical Protection in a Cohort of Ugandan Children.
  The Journal of infectious diseases 2016 Rodriguez-Barraquer I, Arinaitwe E, Jagannathan P, Boyle MJ, Tappero J, Muhindo M, Kamya MR, Dorsey G, Drakeley C, Ssewanyana I, Smith DL, Greenhouse B
• Assessing the global threat from Zika virus.
  Science (New York, N.Y.) 2016 Lessler J, Chaisson LH, Kucirka LM, Bi Q, Grantz K, Salje H, Carcelen AC, Ott CT, Sheffield JS, Ferguson NM, Cummings DA, Metcalf CJ, Rodriguez-Barraquer I
• Trends in the Mechanistic and Dynamic Modeling of Infectious Diseases.
  Current epidemiology reports 2016 Lessler J, Azman AS, Grabowski MK, Salje H, Rodriguez-Barraquer I
• Predicting intensities of Zika infection and microcephaly using transmission intensities of other arboviruses.
  Bulletin of the World Health Organization 2016 Isabel Rodríguez-Barraquer, Henrik Salje, Justin Lessler, Derek AT Cummings
• Dependability of results in conference abstracts of randomized controlled trials in ophthalmology and author financial conflicts of interest as a factor associated with full publication.
  Trials 2016 Saldanha IJ, Scherer RW, Rodriguez-Barraquer I, Jampel HD, Dickersin K
• Dengue Vaccine in Regions of Endemic Disease.
  The New England journal of medicine 2016 Rodriguez-Barraquer I, Salje H, Cummings DA
• Chapter 18 Viral Epidemiology Tracking Viruses with Smartphones and Social Media.
  Viral Pathogenesis 2016 Kaitlin Rainwater-Lovett, Isabel Rodriguez-Barraquer, William J. Moss
• Dengue Virus (DENV) Neutralizing Antibody Kinetics in Children After Symptomatic Primary and Postprimary DENV Infection.
  The Journal of infectious diseases 2015 Clapham HE, Rodriguez-Barraquer I, Azman AS, Althouse BM, Salje H, Gibbons RV, Rothman AL, Jarman RG, Nisalak A, Thaisomboonsuk B, Kalayanarooj S, Nimmannitya S, Vaughn DW, Green S, Yoon IK, Cummings …
• Enhancing disease surveillance with novel data streams: challenges and opportunities.
  EPJ data science 2015 Althouse BM, Scarpino SV, Meyers LA, Ayers JW, Bargsten M, Baumbach J, Brownstein JS, Castro L, Clapham H, Cummings DA, Del Valle S, Eubank S, Fairchild G, Finelli L, Generous N, George D, Harper DR, …
• Reconstruction of 60 Years of Chikungunya Epidemiology in the Philippines Demonstrates Episodic and Focal Transmission.
  The Journal of infectious diseases 2015 Salje H, Cauchemez S, Alera MT, Rodriguez-Barraquer I, Thaisomboonsuk B, Srikiatkhachorn A, Lago CB, Villa D, Klungthong C, Tac-An IA, Fernandez S, Velasco JM, Roque VG, Nisalak A, Macareo LR, Levy JW…
• The Hidden Burden of Dengue and Chikungunya in Chennai, India.
  PLoS neglected tropical diseases 2015 Rodríguez-Barraquer I, Solomon SS, Kuganantham P, Srikrishnan AK, Vasudevan CK, Iqbal SH, Balakrishnan P, Solomon S, Mehta SH, Cummings DA
• Differential efficacy of dengue vaccine by immune status.
  Lancet (London, England) 2015 Rodriguez-Barraquer I, Mier-Y-Teran-Romero L, Ferguson N, Burke DS, Cummings DAT
• Robust, reproducible, industrialized, standard membrane feeding assay for assessing the transmission blocking activity of vaccines and drugs against Plasmodium falciparum.
  Malaria journal 2015 Li T, Eappen AG, Richman AM, Billingsley PF, Abebe Y, Li M, Padilla D, Rodriguez-Barraquer I, Sim BK, Hoffman SL
• Estimating Potential Incidence of MERS-CoV Associated with Hajj Pilgrims to Saudi Arabia, 2014.
  PLoS currents 2014 Lessler J, Rodriguez-Barraquer I, Cummings DA, Garske T, Van Kerkhove M, Mills H, Truelove S, Hakeem R, Albarrak A, Ferguson NM, MERS-CoV Scenario Modeling Working Group, MERS-CoV Scenario Modeling …
• Variability in dengue titer estimates from plaque reduction neutralization tests poses a challenge to epidemiological studies and vaccine development.
  PLoS neglected tropical diseases 2014 Salje H, Rodríguez-Barraquer I, Rainwater-Lovett K, Nisalak A, Thaisomboonsuk B, Thomas SJ, Fernandez S, Jarman RG, Yoon IK, Cummings DA
• A review of transmission models of dengue: a quantitative and qualitative analysis of model features.
  Dengue and dengue hemorrhagic fever 2014 T. A. Perkins, R. C. Reiner, I. Rodriguez-Barraquer, D. L. Smith, T. W. Scott, D. A. T. Cummings
• Potential opportunities and perils of imperfect dengue vaccines.
  Vaccine 2013 Rodriguez-Barraquer I, Mier-y-Teran-Romero L, Schwartz IB, Burke DS, Cummings DA
• Revisiting Rayong: shifting seroprofiles of dengue in Thailand and their implications for transmission and control.
  American journal of epidemiology 2013 Rodríguez-Barraquer I, Buathong R, Iamsirithaworn S, Nisalak A, Lessler J, Jarman RG, Gibbons RV, Cummings DA
• Challenges in the interpretation of dengue vaccine trial results.
  PLoS neglected tropical diseases 2013 Rodriguez-Barraquer I, Mier-y-Teran-Romero L, Burke DS, Cummings DA
• Variation in dengue virus plaque reduction neutralization testing: systematic review and pooled analysis.
  BMC infectious diseases 2012 Rainwater-Lovett K, Rodriguez-Barraquer I, Cummings DA, Lessler J
• Noninferiority of miltefosine versus meglumine antimoniate for cutaneous leishmaniasis in children.
  The Journal of infectious diseases 2012 Rubiano LC, Miranda MC, Muvdi Arenas S, Montero LM, Rodríguez-Barraquer I, Garcerant D, Prager M, Osorio L, Rojas MX, Pérez M, Nicholls RS, Gore Saravia N
• From re-emergence to hyperendemicity: the natural history of the dengue epidemic in Brazil.
  PLoS neglected tropical diseases 2011 Rodriguez-Barraquer I, Cordeiro MT, Braga C, de Souza WV, Marques ET, Cummings DA
• Etiologic agent of an epidemic of cutaneous leishmaniasis in Tolima, Colombia.
  The American journal of tropical medicine and hygiene 2008 Rodríguez-Barraquer I, Góngora R, Prager M, Pacheco R, Montero LM, Navas A, Ferro C, Miranda MC, Saravia NG
• Tensile bond strength and SEM evaluation of caries-affected dentin using dentin adhesives.
  Journal of dental research 1995 Nakajima M, Sano H, Burrow MF, Tagami J, Yoshiyama M, Ebisu S, Ciucchi B, Russell CM, Pashley DH