Eliah Shamir, MD, PhD
Assistant Professor
Pathology
School of Medicine

Education & Training

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• Residency Anatomic Pathology University of California, San Francisco 06/2019
• Fellowship Surgical Pathology, Breast Pathology University of California, San Francisco 06/2019
• MD Johns Hopkins School of Medicine 05/2016
• PhD Cell Biology Johns Hopkins School of Medicine 05/2016
• BS Biomedical Engineering, Global Public Health University of Virginia 05/2008

Publications (21)

Top publication keywords:
Receptor, ErbB-2CadherinsCell Culture TechniquesCarcinoma, Adenoid CysticMammary Glands, HumanIntercellular Signaling Peptides and ProteinsEpitheliumMorphogenesisEpithelial CellsReceptor, ErbB-3Carcinoma, LobularAmyloidosisBreast Carcinoma In SituTwist-Related Protein 1Carcinoma, Neuroendocrine

• Epimorphic regeneration in the mammalian tympanic membrane.
  NPJ Regenerative medicine 2023 Scaria SM, Frumm SM, Vikram EP, Easow SA, Sheth AH, Shamir ER, Yu SK, Tward AD
• Specific Oral Microbial Differences in Proteobacteria and Bacteroidetes Are Associated with Distinct Sites When Moving from Healthy Mucosa to Oral Dysplasia-A Microbiome and Gene Profiling Study and Focused Review.
  Microorganisms 2023 Radaic A, Shamir ER, Jones K, Villa A, Garud NR, Tward AD, Kamarajan P, Kapila YL
• Solid-Basaloid Adenoid Cystic Carcinoma of the Breast: An Aggressive Subtype Enriched for Notch Pathway and Chromatin Modifier Mutations With MYB Overexpression.
  Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc 2023 Shamir ER, Bean GR, Schwartz CJ, Vohra P, Wang A, Allard GM, Wolsky RJ, Garcia JJ, Chen YY, Krings G
• An agonistic anti-signal regulatory protein α antibody for chronic inflammatory diseases.
  Cell reports. Medicine 2023 Xie MM, Dai B, Hackney JA, Sun T, Zhang J, Jackman JK, Jeet S, Irizarry-Caro RA, Fu Y, Liang Y, Bender H, Shamir ER, Keir ME, Bevers J, Nakamura G, Townsend MJ, Fox DA, Scherl A, Lee WP, Martin F, …
• Improved handling and embedding schemes for cultured murine neuroretinal explants.
  Journal of histotechnology 2022 Haller S, Marton RM, Marroquin KA, Shamir ER

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• Autophagic Degradation of NBR1 Restricts Metastatic Outgrowth during Mammary Tumor Progression.
  Developmental cell 2020 Marsh T, Kenific CM, Suresh D, Gonzalez H, Shamir ER, Mei W, Tankka A, Leidal AM, Kalavacherla S, Woo K, Werb Z, Debnath J
• Genetic analysis of pleomorphic and florid lobular carcinoma in situ variants: frequent ERBB2/ERBB3 alterations and clonal relationship to classic lobular carcinoma in situ and invasive lobular carcinoma.
  Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc 2020 Shamir ER, Chen YY, Krings G
• Pleomorphic and Florid Lobular Carcinoma In Situ Variants of the Breast: A Clinicopathologic Study of 85 Cases With and Without Invasive Carcinoma From a Single Academic Center.
  The American journal of surgical pathology 2019 Shamir ER, Chen YY, Chu T, Pekmezci M, Rabban JT, Krings G
• De novo leukocyte chemotactic factor 2 amyloidosis in a pediatric renal allograft, 15 years post-transplant.
  Pediatric transplantation 2019 Shamir ER, Lee MM, Walavalkar V
• Identification of high-risk human papillomavirus and Rb/E2F pathway genomic alterations in mutually exclusive subsets of colorectal neuroendocrine carcinoma.
  Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc 2018 Shamir ER, Devine WP, Pekmezci M, Umetsu SE, Krings G, Federman S, Cho SJ, Saunders TA, Jen KY, Bergsland E, Jones K, Kim GE, Kakar S, Chiu CY, Joseph NM
• Myoepithelial cells are a dynamic barrier to epithelial dissemination.
  The Journal of cell biology 2018 Sirka OK, Shamir ER, Ewald AJ
• Twist1-positive epithelial cells retain adhesive and proliferative capacity throughout dissemination.
  Biology open 2016 Shamir ER, Coutinho K, Georgess D, Auer M, Ewald AJ
• Cell-cell communication enhances the capacity of cell ensembles to sense shallow gradients during morphogenesis.
  Proceedings of the National Academy of Sciences of the United States of America 2016 Ellison D, Mugler A, Brennan MD, Lee SH, Huebner RJ, Shamir ER, Woo LA, Kim J, Amar P, Nemenman I, Ewald AJ, Levchenko A
• Adhesion in mammary development: novel roles for E-cadherin in individual and collective cell migration.
  Current topics in developmental biology 2015 Shamir ER, Ewald AJ
• 3D culture assays of murine mammary branching morphogenesis and epithelial invasion.
  Methods in molecular biology (Clifton, N.J.) 2015 Nguyen-Ngoc KV, Shamir ER, Huebner RJ, Beck JN, Cheung KJ, Ewald AJ
• Three-dimensional organotypic culture: experimental models of mammalian biology and disease.
  Nature reviews. Molecular cell biology 2014 Shamir ER, Ewald AJ
• Twist1-induced dissemination preserves epithelial identity and requires E-cadherin.
  The Journal of cell biology 2014 Shamir ER, Pappalardo E, Jorgens DM, Coutinho K, Tsai WT, Aziz K, Auer M, Tran PT, Bader JS, Ewald AJ
• ECM microenvironment regulates collective migration and local dissemination in normal and malignant mammary epithelium.
  Proceedings of the National Academy of Sciences of the United States of America 2012 Nguyen-Ngoc KV, Cheung KJ, Brenot A, Shamir ER, Gray RS, Hines WC, Yaswen P, Werb Z, Ewald AJ
• Nitazoxanide inhibits biofilm production and hemagglutination by enteroaggregative Escherichia coli strains by blocking assembly of AafA fimbriae.
  Antimicrobial agents and chemotherapy 2010 Shamir ER, Warthan M, Brown SP, Nataro JP, Guerrant RL, Hoffman PS
• Robust fluorescent detection of protein fatty-acylation with chemical reporters.
  Journal of the American Chemical Society 2009 Charron G, Zhang MM, Yount JS, Wilson J, Raghavan AS, Shamir E, Hang HC
• Recombinant human insulin-like growth factor-1 induces an anabolic response in malnourished CAPD patients.
  Kidney international 2000 Fouque D, Peng SC, Shamir E, Kopple JD