Abhe Rajagopal, PhD
Assistant Professor
Urology
School of Medicine

Education & Training

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• NIH-F32 Postdoc Radiology & Biomedical Imaging University of California 2023
• Ph.D. Electrical & Computer Engineering University of California 2019
• M.S. Electrical & Computer Engineering University of California 2016
• B.S. Electrical Engineering University of California 2014

Publications (19)

Top publication keywords:
Magnetic Resonance ImagingImage Interpretation, Computer-AssistedRadiotherapy, Image-GuidedCultureProstatePositron-Emission TomographyProstatic NeoplasmsAlgorithmsAndrogen AntagonistsImage Processing, Computer-AssistedRadiotherapy Planning, Computer-AssistedGallium IsotopesDiffusion Magnetic Resonance ImagingPelvic NeoplasmsPositron Emission Tomography Computed Tomography

• Synthesizing raw multicoil MRI data with a deep generative framework.
  Journal of medical imaging (Bellingham, Wash.) 2026 Deveshwar N, Rajagopal A, Lustig M, Larson PEZ
• MRI Metabolic Biomarkers Predict Ischemic Lesion Survival in Hyperacute Stroke: New Insight on Diffusion Reversibility.
  Radiology 2026 Asghariahmadabad M, Ismail A, Shams M, Bahr-Hosseini M, Szeder V, Saver JL, Kurt M, Rajagopal A, Bauer A, Smith WS, Ko N, Narsinh K, Savastano LE, Cooke DL, Hetts SW, Amans MR, Josephson SA, Hess CP, …
• Predicting categorical and continuous Alzheimer's disease outcomes from a single MRI scan.
  Nature aging 2026 Ma D, Pabalan C, Rajagopal A, Akanksha A, Interian Y, Yang Y, Raj A
• UCSF RMaC: University of California San Francisco 3D Multi-Phase Renal Mass CT Dataset with Tumor Segmentations.
  medRxiv : the preprint server for health sciences 2026 Sahin S, Diaz E, Rajagopal A, Abtahi M, Jones S, Dai Q, Kramer S, Wang ZJ, Larson PE
• Cross-species consensus atlas of the primate basal ganglia.
  bioRxiv : the preprint server for biology 2025 Johansen NJ, Fu Y, Schmitz M, Dubuc A, Kempynck N, Wirthlin M, Garcia AD, Hewitt M, Turner MA, Seeman SC, Long B, Liu XP, Dan S, DeBerardine M, Kapen I, Yanny AM, Avola A, Barlow ST, Bertagnolli D, …

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• PULSAR: a Foundation Model for Multi-scale and Multi-cellular Biology.
  bioRxiv : the preprint server for biology 2025 Pang K, Rosen Y, Kedzierska K, He Z, Rajagopal A, Gustafson CE, Huynh G, Leskovec J
• Utility of metastasis-directed radiotherapy with and without hormonal therapy in management of oligometastatic prostate cancer.
  JNCI cancer spectrum 2025 Chen WS, Tuchayi AM, Sabbagh A, Kim I, Porter E, Ashraf-Ganjouei A, Li YR, Witztum A, Rajagopal A, Seyedin SN, Juarez R, Carroll PR, Feng FY, Small EJ, Hope TA, Hong JC
• Deep Learning-Based Tumor Segmentation of Murine Magnetic Resonance Images of Prostate Cancer Patient-Derived Xenografts.
  Tomography (Ann Arbor, Mich.) 2025 Nayak S, Salkever H, Diaz E, Sinha A, Deveshwar N, Hess M, Gibbons M, Sahin S, Rajagopal A, Larson PEZ, Sriram R
• Assessment of lesion insertion tool in pelvis PET/MR data with applications to attenuation correction method development.
  Journal of applied clinical medical physics 2024 Natsuaki Y, Leynes A, Wangerin K, Hamdi M, Rajagopal A, Kinahan PE, Laforest R, Larson PEZ, Hope TA, James SS
• Mixed Supervision of Histopathology Improves Prostate Cancer Classification From MRI.
  IEEE transactions on medical imaging 2024 Rajagopal A, Westphalen AC, Velarde N, Simko JP, Nguyen H, Hope TA, Larson PEZ, Magudia K
• Presurgical 68Ga-PSMA-11 Positron Emission Tomography for Biochemical Recurrence Risk Assessment: A Follow-up Analysis of a Multicenter Prospective Phase 3 Imaging Trial.
  European urology 2023 Djaïleb L, Armstrong WR, Thompson D, Gafita A, Farolfi A, Rajagopal A, Grogan TR, Nguyen K, Benz MR, Hotta M, Barbato F, Ceci F, Schwarzenböck SM, Unterrainer M, Zacho HD, Juarez R, Cooperberg M, …
• Synthesizing Complex-Valued Multicoil MRI Data from Magnitude-Only Images.
  Bioengineering (Basel, Switzerland) 2023 Deveshwar N, Rajagopal A, Sahin S, Shimron E, Larson PEZ
• Federated Learning with Research Prototypes: Application to Multi-Center MRI-based Detection of Prostate Cancer with Diverse Histopathology.
  Academic radiology 2023 Rajagopal A, Redekop E, Kemisetti A, Kulkarni R, Raman S, Sarma K, Magudia K, Arnold CW, Larson PEZ
• Synthetic PET via Domain Translation of 3-D MRI.
  IEEE transactions on radiation and plasma medical sciences 2022 Rajagopal A, Natsuaki Y, Wangerin K, Hamdi M, An H, Sunderland JJ, Laforest R, Kinahan PE, Larson PEZ, Hope TA
• Generation of synthetic megavoltage CT for MRI-only radiotherapy treatment planning using a 3D deep convolutional neural network.
  Medical physics 2022 Scholey JE, Rajagopal A, Vasquez EG, Sudhyadhom A, Larson PEZ
• Harmonization of PET image reconstruction parameters in simultaneous PET/MRI.
  EJNMMI physics 2021 Laforest R, Khalighi M, Natsuaki Y, Rajagopal A, Chandramohan D, Byrd D, An H, Larson P, James SS, Sunderland JJ, Kinahan PE, Hope TA
• A Path to Qualification of PET/MRI Scanners for Multicenter Brain Imaging Studies: Evaluation of MRI-Based Attenuation Correction Methods Using a Patient Phantom.
  Journal of nuclear medicine : official publication, Society of Nuclear Medicine 2021 Catana C, Laforest R, An H, Boada F, Cao T, Faul D, Jakoby B, Jansen FP, Kemp BJ, Kinahan PE, Larson P, Levine MA, Maniawski P, Mawlawi O, McConathy JE, McMillan AB, Price JC, Rajagopal A, Sunderland …
• Noise reduction in intracranial pressure signal using causal shape manifolds.
  Biomedical signal processing and control 2016 Rajagopal A, Hamilton RB, Scalzo F
• Plasmonic field confinement for separate absorption-multiplication in InGaAs nanopillar avalanche photodiodes.
  Scientific reports 2015 Farrell AC, Senanayake P, Hung CH, El-Howayek G, Rajagopal A, Currie M, Hayat MM, Huffaker DL